Evidence map›Paper›PMID 39593122›Full record

ArticleBMC veterinary research2024

Establishment and preliminary application of PCR-RFLP genotyping method for Giardia duodenalis in goats.

Xuanru Mu, Jianchao Guo, Hongcai Wang, Yilong Li, Kaijian Yuan, Hui Xu, Wenjing Zeng, Qiaoyu Li, Xingang Yu, Yang Hong

Abstract read
In one paragraph

Article in BMC veterinary research, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Xuanru Mu *School of Animal Science and Technology, Foshan University, Foshan, 528231, China.
Jianchao Guo *Agro-Tech Extension Center of Guangdong Province, Guangzhou, 510500, China.
Hongcai WangSchool of Animal Science and Technology, Foshan University, Foshan, 528231, China.
Yilong LiSchool of Animal Science and Technology, Foshan University, Foshan, 528231, China.
Kaijian YuanSchool of Animal Science and Technology, Foshan University, Foshan, 528231, China.
Hui XuSchool of Animal Science and Technology, Foshan University, Foshan, 528231, China.
Wenjing ZengSchool of Animal Science and Technology, Foshan University, Foshan, 528231, China.
Qiaoyu LiSchool of Animal Science and Technology, Foshan University, Foshan, 528231, China.
Xingang YuSchool of Animal Science and Technology, Foshan University, Foshan, 528231, China. yuxingang4525@163.com.ORCID http://orcid.org/0000-0002-2363-858X
Yang HongNational Key Laboratory of Intelligent Tracking and Forecasting for Infectious Diseases, Key Laboratory of Parasite and Vector Biology, Collaborating Center for Tropical Diseases, National Institute of Parasitic Diseases, Chinese Center for Diseases Control and Prevention (Chinese Center for Tropical Diseases Research), National Health Commission of the People's Republic of China (NHC), World Health Organization (WHO), National Center for International Research on Tropical Diseases, Shanghai, 200025, China. hongyang_7@126.com.ORCID http://orcid.org/0000-0002-7739-6344

Funding

Basic and Applied Basic Research Foundation of Guangdong Province Grant no. 2022A1515110474Guangdong Provincial Department of Agriculture and Rural Affairs - Guangdong Agricultural Technical Service "Light Cavalry" Project 2024 Grant no. NITG20240253Guizhou Provincial Scientific and Technological Program Qian Ke He (2023) General 183
6 · The paper itself

Abstract

backgroundGiardia duodenalis (G. duodenalis) is a globally distributed zoonotic protozoan that parasitizes the small intestines of humans and various mammals, such as goats and sheep. The objective of this study was to establish a convenient, accurate, and specific method based on restriction fragment length polymorphism (RFLP) for genotyping assemblages A, B and E of G. duodenalis in goats. The β-giardin gene was amplified using primer pairs bgF1, bgR1, bgF2 and bgR2 by nested PCR. The PCR products were digested with the restriction enzymes Hinf I and Bgl I. The established PCR-RFLP method was used to detect and analyze the genetic subtypes of G. duodenalis in 130 fecal samples from goats and compared simultaneously with microscopic examination and nucleic acid sequencing for G. duodenalis.

resultsGenetic sequencing confirmed that the PCR-RFLP method accurately distinguished G. duodenalis assemblages A, B and E, as well as different combinations of mixed infections of these three assemblages. Among the 130 samples tested by PCR-RFLP, a total of 26 samples (20.00%) tested positive for G. duodenalis, a higher sensitivity than microscopic examination at 13.85% (18/130). Sequence alignment analysis revealed that among the 26 PCR-positive samples, two were identified as assemblage AI, while the remaining 24 were identified as assemblage E or E12.

conclusionsThis study established an accurate, efficient and rapid PCR-RFLP genotyping method using the bg sequence of G. duodenalis, enabling accurate identification and effective differentiation of goat-derived G. duodenalis assemblages without requiring sequencing.

Indexed as

GenotypeGiardia lambliaGiardiasisGoat DiseasesGoatsPolymerase Chain ReactionPolymorphism, Restriction Fragment LengthAnimalsCytoskeletal ProteinsFecesGenotyping TechniquesProtozoan ProteinsCytoskeletal Proteinsgiardin protein, Giardia lambliaProtozoan ProteinsGenotypeGiardia DuodenalisGoatPCR-RFLPRestriction enzymes

Identifiers

PMID39593122
PMCPMC11590275

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.