Evidence map›Paper›PMID 39592938›Full record

ArticleBMC microbiology2024

Guardians of resistance and virulence: detection of mec, femA, Van, pvl, hlg and spa genes in methicillin and vancomycin-resistant Staphylococcus aureus from clinical and food samples in Southwestern Nigeria.

Folasade Muibat Adeyemi, Omotayo Opemipo Oyedara, Nana Aishat Yusuf-Omoloye, Olaoniye Habeebat Ajigbewu, Onyinye Lynda Ndaji, Maryam Kikelomo Adegbite-Badmus, Taiwo Samson Olumakinde, Timilehin Emmanuel Oluokun

Abstract read
In one paragraph

Article in BMC microbiology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Salt Stress Accelerates Tyrosine Depletion byFoods (Basel, Switzerland) · 2026
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  5. Prophage typing ofIranian journal of microbiology · 2026
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  6. Advances in methods for rapid detection of Staphylococcus aureus and methicillin-resistant S. aureus.Analytical sciences : the international journal of the Japan Society for Analytical Chemistry · 2025
    Review
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Folasade Muibat AdeyemiDepartment of Microbiology, Faculty of Basic and Applied Sciences, Osun State University, P.M.B. 4494, Osogbo, Osun State, 230212, Nigeria. folasade.adeyemi@uniosun.edu.ng.ORCID 0000-0002-4811-6278
Omotayo Opemipo OyedaraDepartment of Biotechnology, Faculty of Basic and Applied Sciences, Osun State University, P.M.B. 4494, Osogbo, 230212, Nigeria.ORCID 0000-0002-6815-6162
Nana Aishat Yusuf-OmoloyeDepartment of Microbiology, Faculty of Basic and Applied Sciences, Osun State University, P.M.B. 4494, Osogbo, Osun State, 230212, Nigeria.ORCID 0000-0002-5238-4742
Olaoniye Habeebat AjigbewuDepartment of Microbiology, Faculty of Basic and Applied Sciences, Osun State University, P.M.B. 4494, Osogbo, Osun State, 230212, Nigeria.ORCID 0000-0003-4642-8486
Onyinye Lynda NdajiDepartment of Microbiology, Faculty of Basic and Applied Sciences, Osun State University, P.M.B. 4494, Osogbo, Osun State, 230212, Nigeria.
Maryam Kikelomo Adegbite-BadmusDepartment of Microbiology, Faculty of Basic and Applied Sciences, Osun State University, P.M.B. 4494, Osogbo, Osun State, 230212, Nigeria.ORCID 0000-0002-4522-2366
Taiwo Samson OlumakindeMultidisciplinary Research Laboratory, Osun State University, Osogbo, 230212, Nigeria.
Timilehin Emmanuel OluokunMultidisciplinary Research Laboratory, Osun State University, Osogbo, 230212, Nigeria.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundStaphylococcus aureus strains are highly virulent and associated with an eclectic range of severe nosocomial and community-acquired infections.

objectivesThis study assessed methicillin- and vancomycin-resistant Staphylococcus aureus (MRSA/VRSA) from clinical and ready-to-eat (RTE) food sources, screened for antibiotic resistance; and molecular determinants of antibiotic and virulence genes.

methodsAltogether, 465 clinical and RTE food samples were analyzed via conventional microbiological techniques and S. aureus identification was confirmed by nuc gene detection. Phenotypic screening for methicillin and vancomycin-resistance was by agar-screen cum micro-broth dilution respectively, while antibiotic susceptibility testing was done by the disc-diffusion technique. VanA/vanB/VanC1, femA, mecA/mecC; pvl/hlg and spa gene detection was via Polymerase chain reaction.

resultsPhenotypically, 211 Staphylococcal isolates were recovered, 138 (65.4%) of them carrying the nuc gene - all 138 (100.0%) were VRSA, while 59/138 (42.8%) were MRSA phenotypically. Overall, 114/138 (82.6%), 7/138 (5.1%), and 6/138 (4.3%) of isolates had the femA, mecA, and mecC genes, while van genes were detected in only 3 (2.2%) isolates, with virulence determinants pvl, hlg, and spa gene carriage in 8 (5.8%), 10 (7.2%), and 77 (55.8%) isolates respectively. In all, 11.6% carried resistance-associated genes, 55.8% carried virulence genes, and co-detection of resistance and virulence genes was observed in 12.3%. Overall, 96/138 (69.6%) were multidrug-resistant (MDR), while one strain was extremely drug-resistant (XDR). MAR Indices ≥ 0.2 was observed in 83.3% of isolates.

conclusionThis study highlights virulence levels of MRSA and VRSA circulating strains in Osogbo, contributing to their sustained surveillance, and improving available data for successive epidemiology investigations. This study also reports the occurrence of the mecC gene in S. aureus isolates from RTE foods and human samples in Southwestern Nigeria.

Indexed as

Anti-Bacterial AgentsBacterial ProteinsFood MicrobiologyMethicillin-Resistant Staphylococcus aureusMicrobial Sensitivity TestsStaphylococcal InfectionsVirulence FactorsDrug Resistance, Multiple, BacterialFast FoodsHumansLeukocidinsNigeriaVancomycin-Resistant Staphylococcus aureusVirulenceAnti-Bacterial AgentsBacterial ProteinsLeukocidinsVirulence FactorsfemAHlgHuman samplemecCMRSAOsogboPvlRTE foodsSpaVirulenceVRSA

Identifiers

PMID39592938
PMCPMC11590366

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.