Evidence map›Paper›PMID 39592694›Full record

ArticleScientific reports2024

Comparative lipidome and transcriptome provide novel insights into zero-valent iron nanoparticle-treated Fremyella diplosiphon.

Yavuz S Yalcin, Samson Gichuki, Huan Chen, Anithachristy Sigamani Arumanayagam, Shyama Malika Malwalage, Viji Sitther

Erratum issuedAbstract readComparative Study
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors.

Yavuz S YalcinDepartment of Biology, Morgan State University, Baltimore, MD, 21251, USA.
Samson GichukiDepartment of Biology, Morgan State University, Baltimore, MD, 21251, USA.
Huan ChenNational High Magnetic Field Laboratory, Ion Cyclotron Resonance Facility, Florida State University, 1800 East Paul Dirac Dr, Tallahassee, FL, 32310-4005, USA.
Anithachristy Sigamani ArumanayagamDepartment of Pathology and Genomic Medicine, Houston Methodist Hospital Research Institute, Houston, TX, 77030, USA.
Shyama Malika MalwalageDepartment of Biology, Morgan State University, Baltimore, MD, 21251, USA.
Viji SittherDepartment of Biology, Morgan State University, Baltimore, MD, 21251, USA. viji.sitther@morgan.edu.

Funding

Project-002UL1GM118973 · NIGMS · MORGAN STATE UNIVERSITY · PI KAMANGAR, FARIN · 2015 to 2023
$18.8M
National Science Foundation's Nanoscale Interactions Program 1900966NIGMS NIH HHS 5UL1GM118973NIGMS NIH HHS UL1 GM118973NSF Division of Chemistry and Division of Materials Research DMR 2128556
6 · The paper itself

Abstract

Understanding the intricate interplay between nanoparticle-mediated cyanobacterial interactions is pivotal in elucidating their impact on the transcriptome and lipidome. In the present study, total fatty acid methyl esters (FAMEs) in the wild-type (B481-WT) and transformant (B481-SD) Fremyella diplosiphon strains treated with nanoscale zero-valent iron nanoparticles (nZVIs) were characterized, and transcriptome changes analyzed. Comprehensive two-dimensional gas chromatography-time-of-flight mass spectrometry revealed a 20-25% higher percentage of FAMEs in nZVI-treated F. diplosiphon strain B481-SD compared to B481-WT. Accumulation of alkanes was significantly higher (> 1.4 times) in both strains treated with 25.6 mg L

Indexed as

IronLipidomicsMetal NanoparticlesTranscriptomeCyanobacteriaFatty AcidsFlavobacteriaceaeLipid MetabolismFatty AcidsIronCyanobacteriaLipidomeNanoparticlesTranscriptome

Identifiers

PMID39592694
PMCPMC11599946

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.