Evidence map›Paper›PMID 39592593›Full record

ArticleNature communications2024

Developmental hematopoietic stem cell variation explains clonal hematopoiesis later in life.

Jesse Kreger, Jazlyn A Mooney, Darryl Shibata, Adam L MacLean

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. AbioRxiv : the preprint server for biology · 2026
    Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Mapping Hematopoietic Fate after Transplantation.Stem cell reviews and reports · 2025
    Review
  8. Article
  9. Single-cell cloning and its approaches.Frontiers in cell and developmental biology · 2025
    Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors.

Jesse KregerDepartment of Quantitative and Computational Biology, University of Southern California, Los Angeles, CA, USA.ORCID 0000-0001-6438-171X
Jazlyn A MooneyDepartment of Quantitative and Computational Biology, University of Southern California, Los Angeles, CA, USA.ORCID 0000-0002-2369-0855
Darryl ShibataDepartment of Pathology, Keck School of Medicine, University of Southern California, Los Angeles, CA, USA.ORCID 0000-0002-4567-1639
Adam L MacLeanDepartment of Quantitative and Computational Biology, University of Southern California, Los Angeles, CA, USA. macleana@usc.edu.ORCID 0000-0003-0689-7907

Funding

Computational methods to predict gene regulatory network dynamics and cell state transitionsR35GM143019 · NIGMS · UNIVERSITY OF SOUTHERN CALIFORNIA · PI MACLEAN, ADAM L · 2021 to 2025
$2.1M
NIGMS NIH HHS R35 GM143019U.S. Department of Health & Human Services | National Institutes of Health (NIH) R35GM143019
6 · The paper itself

Abstract

Clonal hematopoiesis becomes increasingly common with age, but its cause is enigmatic because driver mutations are often absent. Serial observations infer weak selection indicating variants are acquired much earlier in life with unexplained initial growth spurts. Here we use fluctuating CpG methylation as a lineage marker to track stem cell clonal dynamics of hematopoiesis. We show, via the shared prenatal circulation of monozygotic twins, that weak selection conferred by stem cell variation created before birth can reliably yield clonal hematopoiesis later in life. Theory indicates weak selection will lead to dominance given enough time and large enough population sizes. Human hematopoiesis satisfies both these conditions. Stochastic loss of weakly selected variants is naturally prevented by the expansion of stem cell lineages during development. The dominance of stem cell clones created before birth is supported by blood fluctuating CpG methylation patterns that exhibit low correlation between unrelated individuals but are highly correlated between many elderly monozygotic twins. Therefore, clonal hematopoiesis driven by weak selection in later life appears to reflect variation created before birth.

Indexed as

Clonal HematopoiesisDNA MethylationHematopoietic Stem CellsTwins, MonozygoticAdultAgedCell LineageClone CellsCpG IslandsFemaleHematopoiesisHumansMaleMiddle Aged

Identifiers

PMID39592593
PMCPMC11599844

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.