Evidence map›Paper›PMID 39589550›Full record

ArticleFunctional & integrative genomics2024

Transcriptome-wide investigation and functional characterization reveal a terpene synthase involved in γ-terpinene biosynthesis in Monarda citriodora.

Mir Abdul Wajid, Priyanka Sharma, Aasim Majeed, Sheetal Bhat, Tsering Angmo, Mohd Fayaz, Koushik Pal, Sonali Andotra, Wajid Waheed Bhat, Prashant Misra

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Article in Functional & integrative genomics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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5 · Who and what money

Authors and funding

10 authors.

Mir Abdul WajidPlant Sciences and Agrotechnology Division, CSIR-Indian Institute of Integrative Medicine Canal Road, Jammu, 180001, India.ORCID http://orcid.org/0000-0001-8151-7666
Priyanka SharmaPlant Sciences and Agrotechnology Division, CSIR-Indian Institute of Integrative Medicine Canal Road, Jammu, 180001, India.ORCID http://orcid.org/0009-0009-5970-2668
Aasim MajeedPlant Sciences and Agrotechnology Division, CSIR-Indian Institute of Integrative Medicine Canal Road, Jammu, 180001, India.ORCID http://orcid.org/0000-0002-8215-6425
Sheetal BhatPlant Sciences and Agrotechnology Division, CSIR-Indian Institute of Integrative Medicine Canal Road, Jammu, 180001, India.ORCID http://orcid.org/0009-0007-9188-2692
Tsering AngmoPlant Sciences and Agrotechnology Division, CSIR-Indian Institute of Integrative Medicine Canal Road, Jammu, 180001, India.ORCID http://orcid.org/0009-0005-0827-3630
Mohd FayazPlant Sciences and Agrotechnology Division, CSIR-Indian Institute of Integrative Medicine Canal Road, Jammu, 180001, India.
Koushik PalPlant Sciences and Agrotechnology Division, CSIR-Indian Institute of Integrative Medicine Canal Road, Jammu, 180001, India.ORCID http://orcid.org/0009-0000-8437-8681
Sonali AndotraPlant Sciences and Agrotechnology Division, CSIR-Indian Institute of Integrative Medicine Canal Road, Jammu, 180001, India.ORCID http://orcid.org/0009-0007-4421-6590
Wajid Waheed BhatDivision of Basic Sciences and Humanities, SKUAST-Kashmir, Shalimar, 190025, Srinagar, India.ORCID http://orcid.org/0000-0002-7049-8671
Prashant MisraPlant Sciences and Agrotechnology Division, CSIR-Indian Institute of Integrative Medicine Canal Road, Jammu, 180001, India. pmisra@iiim.res.in.ORCID http://orcid.org/0000-0003-2960-2024

Funding

Council of Scientific and Industrial Research, India HCP0007
6 · The paper itself

Abstract

Monarda citriodora Cerv. ex Lag. is a rich source of industrially important compounds like γ-terpinene, carvacrol, thymol and thymoquinone. Understanding the regulation of γ-terpinene biosynthesis, a precursor for other monoterpenes, could facilitate upscaling of these metabolites in M. citriodora. Therefore, the present study aimed to unravel and characterize the terpene synthase (TPS) involved in γ-terpinene biosynthesis. Homology searches revealed 33 TPS members in the transcriptome assembly of M. citriodora. Based on the correlation of expression patterns and phytochemical profile, McTPS22 emerged as the putative TPS for γ-terpinene biosynthesis. Molecular docking suggested geranyl diphosphate (GPP) as a potential substrate for McTPS22. Heterologous expression in Escherichia coli and Nicotiana benthamiana confirmed the role of McTPS22 in γ-terpinene biosynthesis. Both in-silico prediction and confocal microscopy indicated plastidial localization of the McTPS22. Gene co-expression network analysis revealed 507 genes interacting with McTPS22, including 80 transcription factors (TFs). Of these, 46 TFs had binding sites in the McTPS22 promoter, and 36 showed significant correlations with γ-terpinene accumulation, suggesting they may be potential regulators. Promoter analysis indicated regulation by phytohormones and abiotic factors, confirmed by phytohormone elicitation and QRT-PCR. The histochemical GUS staining suggested that McTPS22 is primarily active in the glandular trichomes of M. citriodora. The present work provides insights into the molecular regulation of biosynthesis of γ-terpinene in M. citriodora.

Indexed as

Alkyl and Aryl TransferasesCyclohexane MonoterpenesPlant ProteinsTranscriptomeAmaryllidaceaeGene Expression Regulation, PlantMolecular Docking SimulationMonoterpenesAlkyl and Aryl TransferasesCyclohexane Monoterpenesgamma-terpineneMonoterpenesPlant Proteinsterpene synthaseGamma terpineneGCNGUSMonarda citriodoraPromoterTerpene synthase

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.