Evidence map›Paper›PMID 39588759›Full record

ArticleNucleic acids research2024

Circular oligomeric particles formed by Ros/MucR family members mediate DNA organization in α-proteobacteria.

Antonio Chaves-Sanjuan, Gianluca D'Abrosca, Veronica Russo, Bert van Erp, Alessandro Del Cont-Bernard, Riccardo Capelli, Luciano Pirone, Martina Slapakova, Domenico Sgambati, Roberto Fattorusso and 11 more

Erratum issuedAbstract read
In one paragraph

Article in Nucleic acids research, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

21 authors.

Antonio Chaves-SanjuanDepartment of Biosciences, University of Milan, Via Celoria 26, 20133 Milano, Italy.ORCID 0000-0003-3287-9024
Gianluca D'AbroscaDepartment of Clinical and Experimental Medicine, University of Foggia, Viale Pinto 1, 71100 Foggia, Italy.
Veronica RussoDepartment of Environmental, Biological, Pharmaceutical Sciences and Technologies, University of Campania "Luigi Vanvitelli", Via Vivaldi 43, 81100 Caserta, Italy.
Bert van ErpMacromolecular Biochemistry, Leiden Institute of Chemistry, Leiden University, Einsteinweg 55, Leiden 2333CC, The Netherlands.
Alessandro Del Cont-BernardDepartment of Biosciences, University of Milan, Via Celoria 26, 20133 Milano, Italy.
Riccardo CapelliDepartment of Biosciences, University of Milan, Via Celoria 26, 20133 Milano, Italy.
Luciano PironeInstitute of Biostructures and Bioimaging, CNR, Via Pietro Castellino 111, 80131 Naples, Italy.
Martina SlapakovaDepartment of Environmental, Biological, Pharmaceutical Sciences and Technologies, University of Campania "Luigi Vanvitelli", Via Vivaldi 43, 81100 Caserta, Italy.
Domenico SgambatiDepartment of Environmental, Biological, Pharmaceutical Sciences and Technologies, University of Campania "Luigi Vanvitelli", Via Vivaldi 43, 81100 Caserta, Italy.
Roberto FattorussoDepartment of Environmental, Biological, Pharmaceutical Sciences and Technologies, University of Campania "Luigi Vanvitelli", Via Vivaldi 43, 81100 Caserta, Italy.ORCID 0000-0002-3539-5343
Carla IserniaDepartment of Environmental, Biological, Pharmaceutical Sciences and Technologies, University of Campania "Luigi Vanvitelli", Via Vivaldi 43, 81100 Caserta, Italy.
Luigi RussoDepartment of Environmental, Biological, Pharmaceutical Sciences and Technologies, University of Campania "Luigi Vanvitelli", Via Vivaldi 43, 81100 Caserta, Italy.
Ian S BartonDepartment of Microbiology and Immunology, Brody School of Medicine, East Carolina University, 600 Moye Blvd, Greenville, NC 27834, USA.
Roy Martin RoopDepartment of Microbiology and Immunology, Brody School of Medicine, East Carolina University, 600 Moye Blvd, Greenville, NC 27834, USA.
Emilia M PedoneInstitute of Biostructures and Bioimaging, CNR, Via Pietro Castellino 111, 80131 Naples, Italy.
Martino BolognesiDepartment of Biosciences, University of Milan, Via Celoria 26, 20133 Milano, Italy.ORCID 0000-0002-9253-5170
Remus T DameMacromolecular Biochemistry, Leiden Institute of Chemistry, Leiden University, Einsteinweg 55, Leiden 2333CC, The Netherlands.ORCID 0000-0001-9863-1692
Paolo V PedoneDepartment of Environmental, Biological, Pharmaceutical Sciences and Technologies, University of Campania "Luigi Vanvitelli", Via Vivaldi 43, 81100 Caserta, Italy.
Marco NardiniDepartment of Biosciences, University of Milan, Via Celoria 26, 20133 Milano, Italy.
Gaetano MalgieriDepartment of Environmental, Biological, Pharmaceutical Sciences and Technologies, University of Campania "Luigi Vanvitelli", Via Vivaldi 43, 81100 Caserta, Italy.
Ilaria BaglivoDepartment of Environmental, Biological, Pharmaceutical Sciences and Technologies, University of Campania "Luigi Vanvitelli", Via Vivaldi 43, 81100 Caserta, Italy.ORCID 0000-0002-3746-3880

Funding

Determining the molecular basis of gene silencing by MucR and defining its role in Brucella virulenceR01AI172822 · NIAID · EAST CAROLINA UNIVERSITY · PI ROY M ROOP · 2023 to 2026
$2.3M
Italian Research Minister PRIN2022 P2022AW2H9National Institute of Allergy and Infectious Diseases R01AI172822Netherlands Organization for Scientific Research OCENW.GROOT.2019.012NIAID NIH HHS R01 AI172822
6 · The paper itself

Abstract

The transcriptional regulator MucR from Brucella species controls the expression of many genes, including those involved in virulence, by binding AT-rich DNA regions. MucR and its homologs belong to the Ros/MucR family, whose members occur in α-proteobacteria. MucR is a recent addition to the family of histone-like nucleoid structuring (H-NS) proteins. Indeed, despite the lack of sequence homology, MucR bears many functional similarities with H-NS and H-NS-like proteins, structuring the bacterial genome and acting as global regulators of transcription. Here we present an integrated cryogenic electron microscopy (cryo-EM), nuclear magnetic resonance, modeling and biochemical study shedding light on the functional architecture of MucR from Brucella abortus and its homolog Ml5 from Mesorhizobium loti. We show that MucR and Ml5 fold in a circular quaternary assembly, which allows it to bridge and condense DNA by binding AT-rich sequences. Our results show that Ros/MucR family members are a novel type of H-NS-like proteins and, based on previous studies, provide a model connecting nucleoid structure and transcription regulation in α-proteobacteria.

Indexed as

Bacterial ProteinsDNA-Binding ProteinsAlphaproteobacteriaAT Rich SequenceBrucella abortusCryoelectron MicroscopyDNA, BacterialGene Expression Regulation, BacterialMesorhizobiumModels, MolecularProtein BindingBacterial ProteinsDNA, BacterialDNA-Binding Proteins

Identifiers

PMID39588759
PMCPMC11662661

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.