Evidence map›Paper›PMID 39587435›Full record

ArticleMolecular plant pathology2024

The Naturally Occurring Amino Acid Substitution in the VPg α1-α2 Loop Breaks eIF4E-Mediated Resistance to PRSV by Enabling VPg to Re-Hijack Another eIF4E Isoform eIF(iso)4E in Watermelon.

Ling-Xi Zhou, Xiao Yin, Zhi-Yong Yan, Jun Jiang, Yan-Ping Tian, Rui Gao, Chao Geng, Xiang-Dong Li

Abstract read
In one paragraph

Article in Molecular plant pathology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Ling-Xi ZhouDepartment of Plant Pathology, College of Plant Protection, Shandong Agricultural University, Tai'an, China.ORCID 0009-0002-7906-5060
Xiao YinShandong Key Laboratory for Green Prevention and Control of Agricultural Pests, Institute of Plant Protection, Shandong Academy of Agricultural Sciences, Ji'nan, China.
Zhi-Yong YanDepartment of Plant Pathology, College of Plant Protection, Shandong Agricultural University, Tai'an, China.
Jun JiangDepartment of Plant Pathology, College of Plant Protection, Shandong Agricultural University, Tai'an, China.
Yan-Ping TianDepartment of Plant Pathology, College of Plant Protection, Shandong Agricultural University, Tai'an, China.ORCID 0000-0002-3452-2013
Rui GaoShandong Institute of Pomology, Tai'an, China.
Chao GengDepartment of Plant Pathology, College of Plant Protection, Shandong Agricultural University, Tai'an, China.ORCID 0000-0003-1054-5314
Xiang-Dong LiDepartment of Plant Pathology, College of Plant Protection, Shandong Agricultural University, Tai'an, China.ORCID 0000-0001-9838-0045

Funding

China Postdoctoral Science Foundation 2021M691973China Postdoctoral Science Foundation 2022T150389Innovation Project of Shandong Academy of Agricultural Sciences CXGC2024A05Innovation Project of Shandong Academy of Agricultural Sciences CXGC2024B11National Natural Science Foundation of China 31801704National Natural Science Foundation of China 32072387the Taishan Scholar Project TS2022-028the Youth Innovation Team Plan for Shandong High Education Institution 2022KJ241
6 · The paper itself

Abstract

Plant resistance, which acts as a selective pressure that affects viral population fitness, leads to the emergence of resistance-breaking virus strains. Most recessive resistance to potyviruses is related to the mutation of eukaryotic translation initiation factor 4E (eIF4E) or its isoforms that break their interactions with the viral genome-linked protein (VPg). In this study, we found that the VPg α1-α2 loop, which is essential for binding eIF4E, is the most variable domain of papaya ringspot virus (PRSV) VPg. PRSV VPg with the naturally occurring amino acid substitution of K105Q or E108G in the α1-α2 loop fails to interact with watermelon (Citrullus lanatus) eIF4E but interacts with watermelon eIF(iso)4E instead. Moreover, PRSV carrying these mutations can break the eIF4E-mediated resistance to PRSV in watermelon accession PI 244019. We further revealed that watermelon eIF(iso)4E with the amino acid substitutions of DNQS to GAAA in the cap-binding pocket could not interact with PRSV VPg with natural amino acid substitution of K105Q or E108G. Therefore, our finding provides a precise target for engineering watermelon germplasm resistant to resistance-breaking PRSV isolates.

Indexed as

Amino Acid SubstitutionCitrullusEukaryotic Initiation Factor-4EPlant DiseasesPlant ProteinsPotyvirusDisease ResistanceProtein IsoformsViral ProteinsEukaryotic Initiation Factor-4EPlant ProteinsProtein IsoformsViral ProteinseIF4EeIF(iso)4EPRSV‐Wresistance breakingVPg

Identifiers

PMID39587435
PMCPMC11588673

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.