Evidence map›Paper›PMID 39585435›Full record

ArticleAntonie van Leeuwenhoek2024

Comparative genomic analyses of aerobic planctomycetes isolated from the deep sea and the ocean surface.

Lise Øvreås, Nicolai Kallscheuer, Rita Calisto, Nicola Bordin, Julia E Storesund, Christian Jogler, Damien Devos, Olga Lage

Abstract readComparative Study
In one paragraph

Article in Antonie van Leeuwenhoek, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Article
  3. The prevalence and distribution ofFrontiers in microbiomes · 2026
    Article
  4. A Self-Sufficient β-Methylarginine Biosynthetic Pathway in Planctomycetes.Chembiochem : a European journal of chemical biology · 2025
    Article
  5. Article
  6. Article
  7. Review
  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Lise ØvreåsDepartment of Biological Sciences, University of Bergen, Bergen, Norway. lise.ovreas@uib.no.
Nicolai KallscheuerDepartment of Microbial Interactions, Friedrich Schiller University, Jena, Germany.
Rita CalistoDepartment of Biology, Faculty of Sciences and CIIMAR, University of Porto, Porto, Portugal.
Nicola BordinInstitute of Structural and Molecular Biology, University College London, London, UK.
Julia E StoresundInstitute of Marine Research, Bergen, Norway.
Christian JoglerDepartment of Microbial Interactions, Friedrich Schiller University, Jena, Germany.
Damien DevosCABD, Universidad Pablo de Olavidade, Seville, Spain.
Olga LageDepartment of Biology, Faculty of Sciences and CIIMAR, University of Porto, Porto, Portugal.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

On the deep and dark seafloor, a cryptic and yet untapped microbial diversity flourishes around hydrothermal vent systems. This remote environment of difficult accessibility exhibits extreme conditions, including high pressure, steep temperature- and redox gradients, limited availability of oxygen and complete darkness. In this study, we analysed the genomes of three aerobic strains belonging to the phylum Planctomycetota that were isolated from two deep-sea iron- rich hydroxide deposits with low temperature diffusive vents. The vents are located in the Arctic and Pacific Ocean at a depth of 600 and 1,734 m below sea level, respectively. The isolated strains Pr1d

Indexed as

Genome, BacterialPhylogenySeawaterEcosystemGenomicsHydrothermal VentsOceans and SeasPacific OceanBiofilmDeep seaGenome comparisonIron hydroxide depositsPlanctomycetotaSurface water

Identifiers

PMID39585435
PMCPMC11588811

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.