Evidence map›Paper›PMID 39584706›Full record

ArticleJournal of visualized experiments : JoVE2024

A Rapid, Simple Workflow for Quantification of External Adult Drosophila Structures.

Laura Martins, Ramy Wong, Fredrick J Larabee, Bree K Grillo-Hill

Abstract readVideo-Audio Media
In one paragraph

Article in Journal of visualized experiments : JoVE, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Laura MartinsDepartment of Biological Sciences, San José State University.
Ramy WongDepartment of Biological Sciences, San José State University.
Fredrick J LarabeeDepartment of Biological Sciences, San José State University.
Bree K Grillo-HillDepartment of Biological Sciences, San José State University; bree.grillo-hill@sjsu.edu.

Funding

Increased Intracellular pH Promotes Cancer Cell BehaviorsR16GM153640 · NIGMS · SAN JOSE STATE UNIVERSITY · PI Bree K. Grillo-Hill · 2024 to 2026
$440k
Roles for Intracellular pH Dynamics in Cancer Cell BehaviorsSC3GM132049 · NIGMS · SAN JOSE STATE UNIVERSITY · PI GRILLO-HILL, BREE K. · 2019 to 2022
$413k
NIGMS NIH HHS R16 GM153640NIGMS NIH HHS SC3 GM132049
6 · The paper itself

Abstract

The Drosophila compound eye is a precisely patterned tissue that has revealed molecular mechanisms and biological processes that drive morphogenesis. It is a simple structure of repeating unit eyes, termed ommatidia, that is used to characterize genetic interactions and gene functions. Mutations that affect eye architecture can be easily detected and analyzed; hence, this system is frequently used in under-resourced institutions. Further phenotypic analysis often includes a Scanning Electron Microscope (SEM) to generate high-magnification images suitable for quantitative analysis. However, SEMs are expensive and require costly reagents; sample preparation spans days; and, often, they need full-time staff for sample preparation and instrument maintenance. This limits their utility at under-resourced institutions or during budgetary austerity. In entomology, the use of high-resolution digital imaging technology is a common practice for the identification and characterization of species. This paper describes a method that combines strategies and allows for high-resolution digital imaging of adult Drosophila structures and quantitative analysis using the open software ImageJ. The workflow is a rapid and student-friendly alternative that remedies the limitations of underfunded and under-resourced research facilities with a cost-effective and rapid approach to quantitative phenotypic analysis.

Indexed as

DrosophilaAnimalsCompound Eye, ArthropodImage Processing, Computer-AssistedSoftwareWorkflow

Identifiers

PMID39584706
PMCPMC12036254

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.