Evidence map›Paper›PMID 39583759›Full record

ArticleJournal of non-Newtonian fluid mechanics2023

A Computational Framework for the Swelling Dynamics of Mucin-like Polyelectrolyte Gels.

Jian Du, Bindi M Nagda, Owen L Lewis, Daniel B Szyld, Aaron L Fogelson

Abstract read
In one paragraph

Article in Journal of non-Newtonian fluid mechanics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Deswelling Dynamics of Chemically-Active Polyelectrolyte Gels.Computational Science--ICCS ... : international conference ... : proceedings. ICCS · 2023
    Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Jian DuDepartment of Mathematical Sciences, Florida Institute of Technology, 150 W. University BLVD, Melbourne, 32901, FL, USA.
Bindi M NagdaDepartment of Mathematical Sciences, Florida Institute of Technology, 150 W. University BLVD, Melbourne, 32901, FL, USA.
Owen L LewisDepartment of Mathematics and Statistics, University of New Mexico, 311 Terrace, Street NE, Albuquerque, 87106, NM, USA.
Daniel B SzyldDepartment of Mathematics, Temple University, 1805 North Broad, Street, Philadelphia, 19122, PA, USA.
Aaron L FogelsonDepartment of Mathematics and Biomedical Engineering, University of Utah, 155 South 1400 East, Salt Lake City, 84112, UT, USA.

Funding

Modeling gastric mucus layer physiologyR01GM131408 · NIGMS · UNIVERSITY OF UTAH · PI FOGELSON, AARON L · 2018 to 2021
$1.5M
NIGMS NIH HHS R01 GM131408
6 · The paper itself

Abstract

Gastric mucus is a polyelectrolyte gel that serves as the primary defense of the stomach lining against acid and digestive enzymes. Mucus is released from granules in specialized cells where it is stored at very high concentration. Experiments show that such a dense mucus gel may swell explosively within a short time period, and that this is accompanied by a massive transport of monovalent cations from the extracellular environment into the densely packed mucus in exchange for divalent calcium that had crosslinked the negatively-charged mucus fibers. We propose a 2D computational method for simulating mucus swelling with a two-fluid model. The model includes electro-diffusive transport of ionic species, the coupled motion of the glycoprotein network and hydrating fluid, and chemical interactions between the network and dissolved ions. Each ionic species in the solvent phase is subject to a Nernst-Planck type equation. Together with the electro-neutrality constraint, these equations constitute a system of non-linear parabolic PDEs subject to an algebraic constraint. The discretized system is solved by a Schur complement reduction scheme. Numerical results indicate that the method is very efficient, robust and accurate, even for problems which exhibit large spatial gradients in the concentration of ions. The new method is combined with our previously-published numerical methods for solving the coupled momentum equations of the solvent and network, extended to account for the chemical forces determined from the distribution of ions between solvent and network and in space. The computational effectiveness of the new methods is demonstrated through accuracy and efficiency metrics and through investigation of some of the factors that influence swelling dynamics.

Indexed as

07.05.Tp47.50.-d47.55.-t61.25.hp82.35.Rs83.10.RsElectrodiffusionGMRESNernst-PlanckPACS: 47.57.NgpreconditioningSaddle point problem

Identifiers

PMID39583759
PMCPMC11584054

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.