Evidence map›Paper›PMID 39583158›Full record

ArticleFrontiers in cellular and infection microbiology2024

Association between genetic clades and cancer prevalence suggested by French-wide study of oncogenic small ruminant β-retrovirus diversity.

Benjamin Riocreux-Verney, Marie Verneret, Rémi Diesler, Christine Dolmazon, Barbara Gineys, Jean-Luc Cadoré, Jocelyn Turpin, Caroline Leroux

Abstract read
In one paragraph

Article in Frontiers in cellular and infection microbiology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Benjamin Riocreux-VerneyViral Infections and Comparative Pathology (IVPC) UMR754, Institut national de recherche pour l'agriculture, l'alimentation et l'environnement (INRAE), Universite Claude Bernard Lyon 1, École Pratique des Hautes Études (EPHE), Université Paris Sciences & Lettres (PSL), Lyon, France.
Marie VerneretViral Infections and Comparative Pathology (IVPC) UMR754, Institut national de recherche pour l'agriculture, l'alimentation et l'environnement (INRAE), Universite Claude Bernard Lyon 1, École Pratique des Hautes Études (EPHE), Université Paris Sciences & Lettres (PSL), Lyon, France.
Rémi DieslerViral Infections and Comparative Pathology (IVPC) UMR754, Institut national de recherche pour l'agriculture, l'alimentation et l'environnement (INRAE), Universite Claude Bernard Lyon 1, École Pratique des Hautes Études (EPHE), Université Paris Sciences & Lettres (PSL), Lyon, France.
Christine DolmazonViral Infections and Comparative Pathology (IVPC) UMR754, Institut national de recherche pour l'agriculture, l'alimentation et l'environnement (INRAE), Universite Claude Bernard Lyon 1, École Pratique des Hautes Études (EPHE), Université Paris Sciences & Lettres (PSL), Lyon, France.
Barbara GineysViral Infections and Comparative Pathology (IVPC) UMR754, Institut national de recherche pour l'agriculture, l'alimentation et l'environnement (INRAE), Universite Claude Bernard Lyon 1, École Pratique des Hautes Études (EPHE), Université Paris Sciences & Lettres (PSL), Lyon, France.
Jean-Luc CadoréViral Infections and Comparative Pathology (IVPC) UMR754, Institut national de recherche pour l'agriculture, l'alimentation et l'environnement (INRAE), Universite Claude Bernard Lyon 1, École Pratique des Hautes Études (EPHE), Université Paris Sciences & Lettres (PSL), Lyon, France.
Jocelyn Turpin *Viral Infections and Comparative Pathology (IVPC) UMR754, Institut national de recherche pour l'agriculture, l'alimentation et l'environnement (INRAE), Universite Claude Bernard Lyon 1, École Pratique des Hautes Études (EPHE), Université Paris Sciences & Lettres (PSL), Lyon, France.
Caroline Leroux *Viral Infections and Comparative Pathology (IVPC) UMR754, Institut national de recherche pour l'agriculture, l'alimentation et l'environnement (INRAE), Universite Claude Bernard Lyon 1, École Pratique des Hautes Études (EPHE), Université Paris Sciences & Lettres (PSL), Lyon, France.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: ENTV (Enzootic Nasal Tumor Virus) and JSRV (Jaagsiekte Sheep Retrovirus) are β-retroviruses responsible for respiratory cancers in sheep and goats. In this study, we analyzed the genetic features of the sheep and goat β-Retroviruses (29 JSRV and 24 ENTV strains) circulating in France to identify molecular signatures associated with disease severity in flocks. Methods: We developed a highly specific PCR to amplify and sequence exogenous targeted regions or near full length proviruses based on limited discriminating motifs along their genomes. Results: The phylogenetic reconstructions based on the Long Terminal Repeat (LTR) and Discussion: This work represents the first nationwide study describing the circulation of the three closely related β-oncogenic retroviruses JSRV, ENTV-1 and ENTV-2 in French sheep and goat flocks. Better characterization of strain genetics is a critical step in monitoring circulating - retroviruses, especially those associated with higher cancer incidence in small ruminants.

Indexed as

Genetic VariationGoatsPhylogenySheep DiseasesAnimalsBetaretrovirusFranceGoat DiseasesJaagsiekte sheep retrovirusNeoplasmsPolymerase Chain ReactionPrevalenceRetroviridae InfectionsSequence Analysis, DNASheepTerminal Repeat SequencesENTV-1ENTV-2genomic epidemiologyJSRVvirulence factors

Identifiers

PMID39583158
PMCPMC11582038

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.