Evidence map›Paper›PMID 39582057›Full record

ArticleNature communications2024

Structural insight into the distinct regulatory mechanism of the HEPN-MNT toxin-antitoxin system in Legionella pneumophila.

Chenglong Jin, Cha-Hee Jeon, Heung Wan Kim, Jin Mo Kang, Yuri Choi, Sung-Min Kang, Hyung Ho Lee, Do-Hee Kim, Byung Woo Han, Bong-Jin Lee

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Chenglong Jin *The Research Institute of Pharmaceutical Sciences, College of Pharmacy, Seoul National University, Seoul, Republic of Korea.ORCID 0000-0001-7186-7136
Cha-Hee Jeon *The Research Institute of Pharmaceutical Sciences, College of Pharmacy, Seoul National University, Seoul, Republic of Korea.
Heung Wan KimThe Research Institute of Pharmaceutical Sciences, College of Pharmacy, Seoul National University, Seoul, Republic of Korea.
Jin Mo KangThe Research Institute of Pharmaceutical Sciences, College of Pharmacy, Seoul National University, Seoul, Republic of Korea.ORCID 0009-0005-4065-0408
Yuri ChoiDepartment of Chemistry, College of Natural Sciences, Seoul National University, Seoul, Republic of Korea.ORCID 0000-0002-9188-3747
Sung-Min KangCollege of Pharmacy, Duksung Women's University, Seoul, Republic of Korea.
Hyung Ho LeeDepartment of Chemistry, College of Natural Sciences, Seoul National University, Seoul, Republic of Korea.ORCID 0000-0003-1168-2484
Do-Hee KimResearch Institute of Pharmaceutical Sciences, College of Pharmacy, Sookmyung Women's University, Seoul, Republic of Korea. dohee.kim@sookmyung.ac.kr.ORCID 0000-0003-2864-9891
Byung Woo HanThe Research Institute of Pharmaceutical Sciences, College of Pharmacy, Seoul National University, Seoul, Republic of Korea. bwhan@snu.ac.kr.ORCID 0000-0001-7571-3791
Bong-Jin LeeMasterMediTech, Seoul, Republic of Korea. lbj@nmr.snu.ac.kr.ORCID 0000-0001-7896-2961

Funding

National Research Foundation of Korea (NRF) 2018R1A5A2024425National Research Foundation of Korea (NRF) 2022R1C1C1006354National Research Foundation of Korea (NRF) RS-2023-00218543National Research Foundation of Korea (NRF) S-2024-A0403-00250
6 · The paper itself

Abstract

HEPN-MNT, a type VII TA module, comprises the HEPN toxin and the MNT antitoxin, which acts as a nucleotidyltransferase that transfers the NMP moiety to the corresponding HEPN toxin, thereby interfering with its toxicity. Here, we report crystal structures of the Legionella pneumophila HEPN-MNT module, including HEPN, AMPylated HEPN, MNT, and the HEPN-MNT complex. Our structural analysis and biochemical assays, suggest that HEPN is a metal-dependent RNase and identify its active site residues. We also elucidate the oligomeric state of HEPN in solution. Interestingly, L. pneumophila MNT, which lacks a long C-terminal α4 helix, controls the toxicity of HEPN toxin via a distinct binding mode with HEPN. Finally, we propose a comprehensive regulatory mechanism of the L. pneumophila HEPN-MNT module based on structural and functional studies. These results provide insight into the type VII HEPN-MNT TA system.

Indexed as

Bacterial ProteinsBacterial ToxinsLegionella pneumophilaToxin-Antitoxin SystemsAntitoxinsCatalytic DomainCrystallography, X-RayModels, MolecularProtein BindingRibonucleasesAntitoxinsBacterial ProteinsBacterial ToxinsRibonucleases

Identifiers

PMID39582057
PMCPMC11586414

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.