Evidence map›Paper›PMID 39580709›Full record

ArticleJournal of cellular and molecular medicine2024

Role of m6A Methylation Regulators in the Diagnosis and Subtype Classification of COPD Based on the GEO Database.

Pingan Zhang, Na Gao, Xiaoning Li, Xudong Zheng, Deyu Kong, Jianjun Wu

Abstract read
In one paragraph

Article in Journal of cellular and molecular medicine, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Regulation of mCell biology and toxicology · 2026
    Review
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Pingan ZhangRespiratory Department, the Third Affiliated Hospital, Beijing University of Chinese Medicine, Beijing, China.
Na GaoRehabilitation College, Zhengzhou Health Vocational College, Zhengzhou, China.
Xiaoning LiRespiratory Department, the Third Affiliated Hospital, Beijing University of Chinese Medicine, Beijing, China.
Xudong ZhengRespiratory Department, the Third Affiliated Hospital, Beijing University of Chinese Medicine, Beijing, China.
Deyu KongRespiratory Department, the Third Affiliated Hospital, Beijing University of Chinese Medicine, Beijing, China.
Jianjun WuRespiratory Department, the Third Affiliated Hospital, Beijing University of Chinese Medicine, Beijing, China.ORCID 0000-0002-8044-3017

Funding

National Natural Science Foundation of China 82274462Natural Science Foundation of Beijing Municipality 7232284The Fifth Batch of National Excellent Clinical Talents of Traditional Chinese Medicine Research Project
6 · The paper itself

Abstract

N6-methyladenosine (m6A) is a prevalent mRNA modifier, yet its role in chronic obstructive pulmonary disease (COPD) remains unexplored. We sourced expression levels of m6A methylation regulators from the GSE76925 dataset. These regulators' differential expression (DEMs) predicted COPD risk via random forest and support vector machine models. Additionally, a nomogram model using DEMs estimated COPD prevalence. We employed consistent cluster analysis of m6A methylation regulators to categorise COPD samples into distinct subtypes. Analyses of immune cell infiltration in these subtypes and differential gene expression (DEGs) across m6A methylation subtypes were conducted. A cell model validated several m6A regulators and their associated pathways. Fifteen m6A methylation regulators showed differential expression and were used in random forest and support vector machine models. Eleven were selected for a nomogram model, which decision curve analysis suggested could benefit patients. Consensus cluster analysis divided the COPD samples into two subtypes: Cluster A and Cluster B. Cluster B was associated with neutrophil and eosinophil-dominated immunity, while Cluster A was linked with monocyte-dominated immunity. Validation of some research findings was achieved through cell experiments. m6A methylation regulators appear instrumental in diagnosing and classifying subtypes of COPD.

Indexed as

AdenosinePulmonary Disease, Chronic ObstructiveCluster AnalysisDatabases, GeneticGene Expression ProfilingGene Expression RegulationHumansMethylationNomogramsRNA, MessengerSupport Vector MachineAdenosineN-methyladenosineRNA, MessengerCOPDdiagnosisdifferential genesm6A methylation regulatorssubtype

Identifiers

PMID39580709
PMCPMC11585962

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.