Evidence map›Paper›PMID 39580444›Full record

ArticlePlant methods2024

AI-powered detection and quantification of post-harvest physiological deterioration (PPD) in cassava using YOLO foundation models and K-means clustering.

Daniela Gómez Ayalde, Juan Camilo Giraldo Londoño, Audberto Quiroga Mosquera, Jorge Luis Luna Melendez, Winnie Gimode, Thierry Tran, Xiaofei Zhang, Michael Gomez Selvaraj

Abstract read
In one paragraph

Article in Plant methods, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Daniela Gómez AyaldeInternational Center for Tropical Agriculture (CIAT), Km 17, Recta Cali-Palmira, Colombia.
Juan Camilo Giraldo LondoñoInternational Center for Tropical Agriculture (CIAT), Km 17, Recta Cali-Palmira, Colombia.
Audberto Quiroga MosqueraInternational Center for Tropical Agriculture (CIAT), Km 17, Recta Cali-Palmira, Colombia.
Jorge Luis Luna MelendezInternational Center for Tropical Agriculture (CIAT), Km 17, Recta Cali-Palmira, Colombia.
Winnie GimodeInternational Center for Tropical Agriculture (CIAT), Km 17, Recta Cali-Palmira, Colombia.
Thierry TranInternational Center for Tropical Agriculture (CIAT), Km 17, Recta Cali-Palmira, Colombia.
Xiaofei ZhangUniversity of California, Davis, CA, USA.
Michael Gomez SelvarajInternational Center for Tropical Agriculture (CIAT), Km 17, Recta Cali-Palmira, Colombia. m.selvaraj@cgiar.org.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundPost-harvest physiological deterioration (PPD) poses a significant challenge to the cassava industry, leading to substantial economic losses. This study aims to address this issue by developing a comprehensive framework in collaboration with cassava breeders.

resultsAdvanced deep learning (DL) techniques such as Segment Anything Model (SAM) and YOLO foundation models (YOLOv7, YOLOv8, YOLOv9, and YOLO-NAS), were used to accurately categorize PPD severity from RGB images captured by cameras or cell phones. YOLOv8 achieved the highest overall mean Average Precision (mAP) of 80.4%, demonstrating superior performance in detecting and classifying different PPD levels across all three models. Although YOLO-NAS had some instability during training, it demonstrated stronger performance in detecting the PPD_0 class, with a mAP of 91.3%. YOLOv7 exhibited the lowest performance across all classes, with an overall mAP of 75.5%. Despite challenges with similar color intensities in the image data, the combination of SAM, image processing techniques such as RGB color filtering, and machine learning (ML) algorithms was effective in removing yellow and gray color sections, significantly reducing the Mean Absolute Error (MAE) in PPD estimation from 20.01 to 15.50. Moreover, Artificial Intelligence (AI)-based algorithms allow for efficient analysis of large datasets, enabling rapid screening of cassava roots for PPD symptoms. This approach is much faster and more streamlined compared to the labor-intensive and time-consuming manual visual scoring methods.

conclusionThese results highlight the significant advancements in PPD detection and quantification in cassava samples using cutting-edge AI techniques. The integration of YOLO foundation models, alongside SAM and image processing methods, has demonstrated promising precision even in scenarios where experts struggle to differentiate closely related classes. This AI-powered model not only effectively streamlines the PPD assessment in the pre-breeding pipeline but also enhances the overall effectiveness of cassava breeding programs, facilitating the selection of PPD-resistant varieties through controlled screening. By improving the precision of PPD assessments, this research contributes to the broader goal of enhancing cassava productivity, quality, and resilience, ultimately supporting global food security efforts.

Indexed as

CassavaCassava breedingDeep learningImage processingMachine learningPost-harvest physiological deterioration (PPD)PPD assessmentSegment Anything Model (SAM)YOLO models

Identifiers

PMID39580444
PMCPMC11585225

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.