Evidence map›Paper›PMID 39579762›Full record

ArticleAmerican journal of human genetics2024

Primary cartilage transcriptional signatures reflect cell-type-specific molecular pathways underpinning osteoarthritis.

Georgia Katsoula, John E G Lawrence, Ana Luiza Arruda, Mauro Tutino, Petra Balogh, Lorraine Southam, Diane Swift, Sam Behjati, Sarah A Teichmann, J Mark Wilkinson and 1 more

Abstract read
In one paragraph

Article in American journal of human genetics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Forkhead box O proteins in chondrocyte aging and diseases.Journal of orthopaedic translation · 2025
    Review
  6. Article
  7. RMD open · 2025
    Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Georgia KatsoulaTechnical University of Munich (TUM), School of Medicine and Health, Graduate School of Experimental Medicine, 81675 Munich, Germany; Institute of Translational Genomics, Helmholtz Zentrum München - German Research Center for Environmental Health, 85764 Neuherberg, Germany; Technical University of Munich (TUM) and Klinikum Rechts der Isar, TUM School of Medicine and Health, 81675 Munich, Germany.
John E G LawrenceDepartment of Trauma and Orthopaedics, Cambridge University Hospitals NHS Foundation Trust, Addenbrooke's Hospital, Box 37, Hills Road, Cambridge CB2 0QQ, UK; Wellcome Sanger Institute, Wellcome Genome Campus, Hinxton CB10 1SA, UK.
Ana Luiza ArrudaTechnical University of Munich (TUM), School of Medicine and Health, Graduate School of Experimental Medicine, 81675 Munich, Germany; Institute of Translational Genomics, Helmholtz Zentrum München - German Research Center for Environmental Health, 85764 Neuherberg, Germany.
Mauro TutinoInstitute of Translational Genomics, Helmholtz Zentrum München - German Research Center for Environmental Health, 85764 Neuherberg, Germany.
Petra BaloghDepartment of Cellular and Molecular Pathology, Royal National Orthopaedic Hospital, Brockley Hill, Stanmore HA7 4LP, UK.
Lorraine SouthamInstitute of Translational Genomics, Helmholtz Zentrum München - German Research Center for Environmental Health, 85764 Neuherberg, Germany.
Diane SwiftSchool of Medicine and Population Health, University of Sheffield, Beech Hill Road, Sheffield S10 2RX, UK.
Sam BehjatiWellcome Sanger Institute, Wellcome Genome Campus, Hinxton CB10 1SA, UK; Department of Paediatrics, University of Cambridge, Cambridge CB2 0QQ, UK.
Sarah A TeichmannWellcome Sanger Institute, Wellcome Genome Campus, Hinxton CB10 1SA, UK; Department of Physics/Cavendish Laboratory, University of Cambridge, JJ Thomson, Cambridge CB3 0HE, UK.
J Mark WilkinsonSchool of Medicine and Population Health, University of Sheffield, Beech Hill Road, Sheffield S10 2RX, UK. Electronic address: j.m.wilkinson@sheffield.ac.uk.
Eleftheria ZegginiInstitute of Translational Genomics, Helmholtz Zentrum München - German Research Center for Environmental Health, 85764 Neuherberg, Germany; Technical University of Munich (TUM) and Klinikum Rechts der Isar, TUM School of Medicine and Health, 81675 Munich, Germany. Electronic address: eleftheria.zeggini@helmholtz-muenchen.de.

Funding

Wellcome Trust 206194Wellcome Trust 211276/Z/18/ZWellcome Trust 220540/Z/20/AWellcome Trust 222902/Z/21/Z
6 · The paper itself

Abstract

Translational efforts in osteoarthritis are hampered by a gap in our understanding of disease processes at the molecular level. Here, we present evidence of pronounced transcriptional changes in high- and low-disease-grade cartilage tissue, pointing to embryonic processes involved in disease progression. We identify shared transcriptional programs between osteoarthritis cartilage and cell populations in the human embryonic and fetal limb, pointing to increases in pre-hypertrophic chondrocytes' transcriptional programs in low-grade cartilage and increases in osteoblastic signatures in high-grade disease tissue. We find that osteoarthritis genetic risk signals are enriched in six gene co-expression modules and show that these transcriptional signatures reflect cell-type-specific expression along the endochondral ossification developmental trajectory. Using this network approach in combination with causal inference analysis, we present evidence of a causal effect on osteoarthritis risk for variants associated with the expression of ten genes that have not been previously reported as effector genes in genome-wide association studies in osteoarthritis. Our findings point to key molecular pathways as drivers of cartilage degeneration and identify high-value drug targets and repurposing opportunities.

Indexed as

ChondrocytesGenome-Wide Association StudyOsteoarthritisCartilageCartilage, ArticularFemaleGene Regulatory NetworksHumansMaleOsteoblastsTranscriptomecell-type-specific expressionchondrocyte populationsdisease pathwaysendochondral ossificationgene co-expression networksgene set analysisosteoarthritisRNA sequencing

Identifiers

PMID39579762
PMCPMC11639091

What OpenQuestion holds

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LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.