Evidence map›Paper›PMID 39579089›Full record

ArticleJournal of the American Medical Informatics Association : JAMIA2025

National COVID Cohort Collaborative data enhancements: a path for expanding common data models.

Kellie M Walters, Marshall Clark, Sofia Dard, Stephanie S Hong, Elizabeth Kelly, Kristin Kostka, Adam M Lee, Robert T Miller, Michele Morris, Matvey B Palchuk and 2 more

Abstract read
In one paragraph

Article in Journal of the American Medical Informatics Association : JAMIA, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Article
  3. Evaluating Redundancy and Biases in EHR Social Determinants of Health Data Screening.medRxiv : the preprint server for health sciences · 2026
    Article
  4. Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Kellie M WaltersNC TraCS Institute, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, United States.ORCID 0000-0002-7473-1709
Marshall ClarkNC TraCS Institute, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, United States.
Sofia DardNC TraCS Institute, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, United States.
Stephanie S HongBiomedical Informatics and Data Science Section, Department of General Internal Medicine, Johns Hopkins University, Baltimore, MD 21287, United States.
Elizabeth KellyNC TraCS Institute, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, United States.
Kristin KostkaNuffield Department of Rheumatology, Orthopaedics and Musculoskeletal Sciences (NDORMS), University of Oxford, Oxford OX3 7HE, United Kingdom.
Adam M LeeNC TraCS Institute, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, United States.
Robert T MillerTufts Clinical and Translational Science Institute, Tufts University, Boston, MA 02111, United States.
Michele MorrisDepartment of Biomedical Informatics, University of Pittsburgh, Pittsburgh, PA 15206, United States.
Matvey B PalchukTriNetX LLC, Cambridge, MA 02140, United States.ORCID 0000-0002-7737-8752
Emily R PfaffDepartment of Medicine, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, United States.ORCID 0000-0002-6840-9756
N3C and RECOVER Consortia

Funding

UNA (UNIFIED NCATS AUTH) MANAGED SERVICE for N3C75N95023D00001 · NIDA · AXLE INFORMATICS, LLC · PI MAYS, GARY · 2023 to 2024
$44.1M
North Carolina Translational and Clinical Sciences Institute (NC TraCS)UM1TR004406 · NCATS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI NICHOLAS J SHAHEEN · 2023 to 2026
$37.5M
TASK ORDER NO. 4, STSS PROGRAM SUPPORT AND TRANSITION-IN (4)75N95021D00001 · NIDA · AXLE INFORMATICS, LLC · PI MAYS, GARY · 2021 to 2022
$27.9M
TUBERCULOSIS PREVENTION IN CHILDREN TWO TO LESS THAN 13 YEARS OF AGE WITH AND WITHOUT HIV75N94023D00001 · NICHD · WESTAT, INC. · PI DRIVER, BARBARA · 2023 to 2025
$19.9M
RADX INNOVATION FUNNEL FOR HIV DIAGNOSTICS - AWARD MANAGEMENT75N92023D00001 · NHLBI · VENTUREWELL · 2024 to 2025
$10.0M
Use of Artificial Intelligence/Machine Learning (AI/ML) to Enhance the STEP Pediatric Excipient Database75N93023D00001 · NIAID · ADVANCED BIOSCIENCE LABORATORIES, INC. · PI SILVERA, PETER · 2023 to 2025
$9.6M
CLC NIH HHS 75N90023D00001N3C Attribution & Publication Policy 1.2-2020-08-25bNCATS NIH HHS 75N95023D00001NCATS NIH HHS UM1 TR004406NHLBI NIH HHS 75N92023D00001NICHD NIH HHS 75N94023D00001NIDA NIH HHS 75N93023D00001NIDA NIH HHS 75N95021D00001NIHNIH HHSORFDO NIH HHS 75N99023D00001
6 · The paper itself

Abstract

objectiveTo support long COVID research in National COVID Cohort Collaborative (N3C), the N3C Phenotype and Data Acquisition team created data designs to aid contributing sites in enhancing their data. Enhancements include long COVID specialty clinic indicator; Admission, Discharge, and Transfer transactions; patient-level social determinants of health; and in-hospital use of oxygen supplementation. MATERIALS AND

methodsFor each enhancement, we defined the scope and wrote guidance on how to prepare and populate the data in a standardized way.

resultsAs of June 2024, 29 sites have added at least one data enhancement to their N3C pipeline. DISCUSSION: The use of common data models is critical to the success of N3C; however, these data models cannot account for all needs. Project-driven data enhancement is required. This should be done in a standardized way in alignment with common data model specifications. Our approach offers a useful pathway for enhancing data to improve fit for purpose.

conclusionIn this initiative, we rapidly produced project-specific data modeling guidance and documentation in support of long COVID research while maintaining a commitment to terminology standards and harmonized data.

Indexed as

Biomedical ResearchCommon Data ElementsCOVID-19HumansUnited Statesclinical informaticscommon data modelsCOVID-19data modelingelectronic health record data

Identifiers

PMID39579089
PMCPMC11756694

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.