Evidence map›Paper›PMID 39578728›Full record

ArticleBMC genomics2024

RNA-seq analysis reveals genes associated with Macrophomina phaseolina-induced host senescence in soybean.

Afsana Noor, Christopher R Little

Abstract read
In one paragraph

Article in BMC genomics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

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2 · The registry

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3 · Its place in the literature

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No citing paper in PubMed yet.

4 · The record

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5 · Who and what money

Authors and funding

2 authors.

Afsana NoorDepartment of Plant Pathology, Kansas State University, Manhattan, KS, 66506, USA. afsanan@ksu.edu.
Christopher R LittleDepartment of Plant Pathology, Kansas State University, Manhattan, KS, 66506, USA. crlittle@ksu.edu.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundCharcoal rot of soybean is caused by the hemibiotrophic fungus Macrophomina phaseolina, a global crop destroyer and an important pathogen in the midwestern USA. The quantitative nature of host resistance and the complexity of the soybean-M. phaseolina interaction at the molecular level have hampered resistance breeding. A previous study showed that L-ascorbic acid (LAA) pre-treatment before M. phaseolina inoculation reduced charcoal rot lesion length in excised soybean stems. This study aimed to elucidate the genetic underpinnings of M. phaseolina-induced senescence and the mitigating effects of ascorbic acid on this physiological process within the same pathosystem.

resultsRNA was sequenced from M. phaseolina-resistant and -susceptible soybean genotypes following M. phaseolina inoculation, LAA, and hydrogen peroxide (H

conclusionsResults revealed transcriptional variation and genes associated with M. phaseolina-induced senescence in soybean. Ascorbic acid induced many photosynthetic genes, suggesting a complex regulation of defense and immunity in the plant against the hemibiotroph. Soybean plants also exhibited enhanced stress responsiveness when treated with H

Indexed as

AscomycotaGlycine maxPlant DiseasesRNA-SeqAscorbic AcidDisease ResistanceGene Expression ProfilingGene Expression Regulation, PlantGene OntologyGenotypeHost-Pathogen InteractionsHydrogen PeroxideSequence Analysis, RNAAscorbic AcidHydrogen PeroxideAscorbic acidCharcoal rotComparative transcriptomicsHost senescenceHydrogen peroxideMacrophomina phaseolinaRNA-seqROS

Identifiers

PMID39578728
PMCPMC11583662

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.