Evidence map›Paper›PMID 39578613›Full record

ArticleScientific reports2024

Attention-based multi-residual network for lung segmentation in diseased lungs with custom data augmentation.

Md Shariful Alam, Dadong Wang, Yulia Arzhaeva, Jesse Alexander Ende, Joanna Kao, Liz Silverstone, Deborah Yates, Olivier Salvado, Arcot Sowmya

Abstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

9 authors.

Md Shariful AlamSchool of Computer Science and Engineering, University of New South Wales, Sydney, Australia. md_shariful.alam@unsw.edu.au.
Dadong WangCSIRO Data61, Sydney, Australia.
Yulia ArzhaevaCSIRO Data61, Sydney, Australia.
Jesse Alexander EndeDepartment of Radiology, St Vincent's Hospital Sydney, Darlinghurst, NSW, 2010, Australia.
Joanna KaoDepartment of Radiology, St Vincent's Hospital Sydney, Darlinghurst, NSW, 2010, Australia.
Liz SilverstoneDepartment of Radiology, St Vincent's Hospital Sydney, Darlinghurst, NSW, 2010, Australia.
Deborah YatesDepartment of Thoracic Medicine, St Vincent's Hospital Sydney, Darlinghurst, NSW, 2010, Australia.
Olivier SalvadoSchool of Electrical Engineering & Robotics, Queensland University of Technology, Brisbane, QLD, 4001, Australia.
Arcot SowmyaSchool of Computer Science and Engineering, University of New South Wales, Sydney, Australia.

Funding

Coal Services Health and Safety Trust 20656CSIRO Health and Medical Human Research Ethics Committee LR 22/2016
6 · The paper itself

Abstract

Lung disease analysis in chest X-rays (CXR) using deep learning presents significant challenges due to the wide variation in lung appearance caused by disease progression and differing X-ray settings. While deep learning models have shown remarkable success in segmenting lungs from CXR images with normal or mildly abnormal findings, their performance declines when faced with complex structures, such as pulmonary opacifications. In this study, we propose AMRU++, an attention-based multi-residual UNet++ network designed for robust and accurate lung segmentation in CXR images with both normal and severe abnormalities. The model incorporates attention modules to capture relevant spatial information and multi-residual blocks to extract rich contextual and discriminative features of lung regions. To further enhance segmentation performance, we introduce a data augmentation technique that simulates the features and characteristics of CXR pathologies, addressing the issue of limited annotated data. Extensive experiments on public and private datasets comprising 350 cases of pneumoconiosis, COVID-19, and tuberculosis validate the effectiveness of our proposed framework and data augmentation technique.

Indexed as

COVID-19Deep LearningLungHumansLung DiseasesPneumoconiosisRadiographic Image Interpretation, Computer-AssistedRadiography, ThoracicSARS-CoV-2

Identifiers

PMID39578613
PMCPMC11584877

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.