Evidence map›Paper›PMID 39578406›Full record

ArticleBiophysical journal2025

Formation of multicompartment structures through aging of protein-RNA condensates.

Katarzyna Makasewicz, Timo N Schneider, Prerit Mathur, Stavros Stavrakis, Andrew J deMello, Paolo Arosio

Abstract read
In one paragraph

Article in Biophysical journal, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Immiscible proteins compete for RNA binding to order condensate layers.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  6. Review
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Katarzyna MakasewiczDepartment of Chemistry and Applied Biosciences ETH Zürich, Zurich, Switzerland.
Timo N SchneiderDepartment of Chemistry and Applied Biosciences ETH Zürich, Zurich, Switzerland.
Prerit MathurDepartment of Chemistry and Applied Biosciences ETH Zürich, Zurich, Switzerland.
Stavros StavrakisDepartment of Chemistry and Applied Biosciences ETH Zürich, Zurich, Switzerland.
Andrew J deMelloDepartment of Chemistry and Applied Biosciences ETH Zürich, Zurich, Switzerland.
Paolo ArosioDepartment of Chemistry and Applied Biosciences ETH Zürich, Zurich, Switzerland. Electronic address: paolo.arosio@chem.ethz.ch.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cells can dynamically organize reactions through the formation of biomolecular condensates. These viscoelastic networks exhibit complex material properties and mesoscale architectures, including the ability to form multiphase assemblies. It was shown previously that condensates with complex architectures may arise at equilibrium in multicomponent systems or in condensates that were driven out of equilibrium by changes in external parameters such as temperature. In this study, we demonstrate that the aging of initially homogeneous protein-RNA condensates can spontaneously lead to the formation of kinetically arrested double-emulsion and core-shell structures without changes in external variables such as temperature or solution conditions. By combining time-resolved fluorescence-based experimental techniques with simulations based on the Cahn-Hilliard theory, we show that, as the protein-RNA condensates age, the decrease of the relative strength of protein-RNA interactions induces the release of RNA molecules from the dense phase. In condensates exceeding a critical size, aging combined with slow diffusion of the macromolecules trigger nucleation of dilute phase inside the condensates, which leads to the formation of double-emulsion structures. These findings illustrate a new mechanism of formation of multicompartment condensates.

Indexed as

RNABiomolecular CondensatesDiffusionEmulsionsKineticsTime FactorsEmulsionsRNA

Identifiers

PMID39578406
PMCPMC11739879

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.