Evidence map›Paper›PMID 39577746›Full record

ArticleMolecules and cells2024

An RXLR effector disrupts vesicle trafficking at ER-Golgi interface for Phytophthora capsici pathogenicity.

Jihyun Kim, Jesse Kaleku, Haeun Kim, Minji Kang, Hui Jeong Kang, Jongchan Woo, Hongshi Jin, Seungmee Jung, Cécile Segonzac, Eunsook Park and 1 more

Abstract read
In one paragraph

Article in Molecules and cells, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Review
  2. Article
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  5. Brief guide to gene cloning.Molecules and cells · 2025
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Jihyun KimDepartment of Agriculture, Forestry and Bioresources, Plant Genomics and Breeding Institute, College of Agriculture and Life Science, Seoul National University, Seoul 08826, Republic of Korea; Plant Immunity Research Center, College of Agriculture and Life Science, Seoul National University, Seoul 08826, Republic of Korea.
Jesse KalekuDepartment of Molecular Biology, College of Agricultural, Life Sciences and Natural Resources, University of Wyoming, WY 82071, USA.
Haeun KimDepartment of Agriculture, Forestry and Bioresources, Plant Genomics and Breeding Institute, College of Agriculture and Life Science, Seoul National University, Seoul 08826, Republic of Korea; Plant Immunity Research Center, College of Agriculture and Life Science, Seoul National University, Seoul 08826, Republic of Korea.
Minji KangDepartment of Agriculture, Forestry and Bioresources, Plant Genomics and Breeding Institute, College of Agriculture and Life Science, Seoul National University, Seoul 08826, Republic of Korea; Plant Immunity Research Center, College of Agriculture and Life Science, Seoul National University, Seoul 08826, Republic of Korea.
Hui Jeong KangInnocorelix, Seoul 07572, Republic of Korea.
Jongchan WooDepartment of Molecular Biology, College of Agricultural, Life Sciences and Natural Resources, University of Wyoming, WY 82071, USA.
Hongshi JinDepartment of Molecular Biology, College of Agricultural, Life Sciences and Natural Resources, University of Wyoming, WY 82071, USA.
Seungmee JungDepartment of Molecular Biology, College of Agricultural, Life Sciences and Natural Resources, University of Wyoming, WY 82071, USA.
Cécile SegonzacDepartment of Agriculture, Forestry and Bioresources, Plant Genomics and Breeding Institute, College of Agriculture and Life Science, Seoul National University, Seoul 08826, Republic of Korea; Plant Immunity Research Center, College of Agriculture and Life Science, Seoul National University, Seoul 08826, Republic of Korea.
Eunsook ParkDepartment of Molecular Biology, College of Agricultural, Life Sciences and Natural Resources, University of Wyoming, WY 82071, USA. Electronic address: epark4@uwyo.edu.
Doil ChoiDepartment of Agriculture, Forestry and Bioresources, Plant Genomics and Breeding Institute, College of Agriculture and Life Science, Seoul National University, Seoul 08826, Republic of Korea; Plant Immunity Research Center, College of Agriculture and Life Science, Seoul National University, Seoul 08826, Republic of Korea. Electronic address: doil@snu.ac.kr.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Phytophthora species, an oomycete plant pathogen, secrete effectors into plant cells throughout their life cycle for manipulating host immunity to achieve successful colonization. However, the molecular mechanisms underlying effector-triggered necrotic cell death remain elusive. In this study, we identified an RXLR (amino acid residue; Arginine-Any amino acid-Leucine-Arginine motif) effector (Pc12) from Phytophthora capsici, which contributes to virulence and induces necrosis by triggering a distinct endoplasmic reticulum (ER) stress response through its interaction with Rab13-2. The necrotic cell death induced by Pc12 did not exhibit conventional effector-triggered immunity-mediated hypersensitive cell death, including the involvement of nucleotide-binding site leucine-rich repeat downstream signaling components and transcriptional reprogramming of defense-related genes. Instead, it alters the localization of ER-resident proteins and confines secretory proteins within the ER. Pc12 directly interacts with Rab13-2, which is primarily localized to the ER and Golgi apparatus, resulting in a diminished Rab13-2 signal on the Golgi apparatus. Furthermore, Rab13-2 exhibits increased affinity for its interactor, Rab escort protein 1, in the presence of Pc12. Structural predictions revealed that a specific residue of Rab13-2 is crucial for binding to the C-terminus of Pc12. Substitution of this residue reduced its interaction with Pc12 and impaired P. capsici infection while maintaining its interaction with Rab escort protein 1 and prenylated Rab acceptor 1. These findings provide insight into how a pathogen effector induces a distinct form of necrotic cell death to facilitate colonization of the host plant by disrupting the recycling of Rab13-2, a protein involved in vesicle trafficking at the ER-Golgi interface.

Indexed as

Endoplasmic ReticulumGolgi ApparatusPhytophthoraEndoplasmic Reticulum StressNicotianaPlant DiseasesProtein Transportrab GTP-Binding ProteinsVirulencerab GTP-Binding ProteinsER stressPhytophthora capsiciRab small GTPaseRXLR effectorVesicle trafficking

Identifiers

PMID39577746
PMCPMC11683230

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.