Evidence map›Paper›PMID 39576112›Full record

ArticlemBio2025

The

Julia S Ngo, Piyush Amitabh, Jonah G Sokoloff, Calvin Trinh, Travis J Wiles, Karen Guillemin, Raghuveer Parthasarathy

Abstract read
In one paragraph

Article in mBio, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Characterizing trajectories of innate immune cells in larval zebrafish.bioRxiv : the preprint server for biology · 2025
    Article
  7. Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Julia S NgoInstitute of Molecular Biology, University of Oregon, Eugene, Oregon, USA.
Piyush AmitabhDepartment of Physics, University of Oregon, Eugene, Oregon, USA.
Jonah G SokoloffInstitute of Molecular Biology, University of Oregon, Eugene, Oregon, USA.
Calvin TrinhDepartment of Molecular Biology & Biochemistry, University of California, Irvine, California, USA.
Travis J WilesDepartment of Molecular Biology & Biochemistry, University of California, Irvine, California, USA.
Karen GuilleminInstitute of Molecular Biology, University of Oregon, Eugene, Oregon, USA.
Raghuveer ParthasarathyDepartment of Physics, University of Oregon, Eugene, Oregon, USA.ORCID 0000-0002-6006-4749

Funding

Live Imaging CoreP01GM125576 · NIGMS · UNIVERSITY OF OREGON · PI GUILLEMIN, KAREN J · 2018 to 2022
$7.8M
HHS | National Institutes of Health (NIH) P01GM125576National Science Foundation (NSF) 2310570NIGMS NIH HHS P01 GM125576
6 · The paper itself

Abstract

Intestinal microbes, whether resident or transient, influence the physiology of their hosts, altering both the chemical and the physical characteristics of the gut. An example of the latter is the human pathogen IMPORTANCE: Gut microbes, whether beneficial, harmful, or neutral, can have dramatic effects on host activities. The human pathogen

Indexed as

Gastrointestinal MotilityMacrophagesType VI Secretion SystemsVibrio choleraeZebrafishAnimalsBacterial ProteinsIntestinesBacterial ProteinsType VI Secretion Systemsmacrophagesperistalsistype VI secretion systemVibriozebrafish

Identifiers

PMID39576112
PMCPMC11708011

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.