Evidence map›Paper›PMID 39574591›Full record

ArticlebioRxiv : the preprint server for biology2024

The conserved HIV-1 spacer peptide 2 triggers matrix lattice maturation.

James C V Stacey, Dominik Hrebík, Elizabeth Nand, Snehith Dyavari Shetty, Kun Qu, Marius Boicu, Maria Anders-Össwein, Robert A Dick, Walther Mothes, Hans-Georg Kräusslich and 2 more

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors.

James C V StaceyDepartment of Cell and Virus Structure, Max Planck Institute of Biochemistry, 82152 Martinsried, Germany.ORCID 0000-0003-2484-8738
Dominik HrebíkDepartment of Cell and Virus Structure, Max Planck Institute of Biochemistry, 82152 Martinsried, Germany.ORCID 0000-0003-4568-0196
Elizabeth NandDepartment of Microbial Pathogenesis, Yale University School of Medicine, New Haven, CT 06536, USA.ORCID 0000-0003-4816-9449
Snehith Dyavari ShettyDepartment of Infectious Diseases, Virology, Heidelberg University, 69120 Heidelberg, Germany.ORCID 0009-0003-0786-9403
Kun QuInfectious Diseases Translational Research Programme, Department of Biochemistry, Yong Loo Lin School of Medicine, National University of Singapore, 117545, Singapore.ORCID 0000-0002-3152-2237
Marius BoicuDepartment of Cell and Virus Structure, Max Planck Institute of Biochemistry, 82152 Martinsried, Germany.
Maria Anders-ÖssweinDepartment of Infectious Diseases, Virology, Heidelberg University, 69120 Heidelberg, Germany.
Robert A DickDepartment of Molecular Biology and Genetics, Cornell University, Ithaca, NY 14853, USA.ORCID 0000-0003-3693-2531
Walther MothesDepartment of Microbial Pathogenesis, Yale University School of Medicine, New Haven, CT 06536, USA.ORCID 0000-0002-3367-7240
Hans-Georg KräusslichDepartment of Infectious Diseases, Virology, Heidelberg University, 69120 Heidelberg, Germany.ORCID 0000-0002-8756-329X
Barbara MüllerDepartment of Infectious Diseases, Virology, Heidelberg University, 69120 Heidelberg, Germany.ORCID 0000-0001-5726-5585
John A G BriggsDepartment of Cell and Virus Structure, Max Planck Institute of Biochemistry, 82152 Martinsried, Germany.ORCID 0000-0003-3990-6910

Funding

Predoctoral Training Program in VirologyT32AI055403 · NIAID · YALE UNIVERSITY · PI KUMAR, PRITI, MOTHES, WALTHER H · 2003 to 2024
$3.6M
HIV-1 Env protein structure and function assessed by parallel smFRET and cryoETR37AI150560 · NIAID · YALE UNIVERSITY · PI WALTHER H MOTHES · 2023 to 2026
$3.2M
NIAID NIH HHS R37 AI150560NIAID NIH HHS T32 AI055403
6 · The paper itself

Abstract

HIV-1 particles are released in an immature, non-infectious form. Proteolytic cleavage of the main structural polyprotein Gag into functional domains induces rearrangement into mature, infectious virions. In immature virus particles, the Gag membrane binding domain, MA, forms a hexameric protein lattice that undergoes structural transition upon cleavage into a distinct, mature MA lattice. The mechanism of MA lattice maturation is unknown. Here we show that released spacer peptide 2 (SP2), a conserved peptide of unknown function situated ~300 residues downstream of MA, binds MA to induce structural maturation. By high-resolution in-virus structure determination of MA, we show that MA does not bind lipid into a side pocket as previously thought, but instead binds SP2 as an integral part of the protein-protein interfaces that stabilise the mature lattice. Analysis of Gag cleavage site mutants showed that SP2 release is required for MA maturation, and we demonstrate that SP2 is sufficient to induce maturation of purified MA on lipid layers in vitro. SP2-triggered MA maturation correlated with faster fusion of virus with target cells. Our results reveal a new, unexpected interaction between two HIV-1 components, provide a high-resolution structure of mature MA, establish the trigger of MA structural maturation, and assign function to the SP2 peptide.

Identifiers

PMID39574591
PMCPMC11580929

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.