Evidence map›Paper›PMID 39572555›Full record

ArticleNature communications2024

Glycan-induced structural activation softens the human papillomavirus capsid for entry through reduction of intercapsomere flexibility.

Yuzhen Feng, Dominik van Bodegraven, Alan Kádek, Ignacio L B Munguira, Laura Soria-Martinez, Sarah Nentwich, Sreedeepa Saha, Florian Chardon, Daniel Kavan, Charlotte Uetrecht and 2 more

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Functional diversity in GII.4 norovirus entry: HBGA binding and capsid clustering dynamics.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  9. Review
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Yuzhen Feng *Moleculaire Biofysica, Zernike Instituut, Rijksuniversiteit Groningen, Groningen, Netherlands.
Dominik van Bodegraven *Institute of Cellular Virology, ZMBE, University of Münster, Münster, Germany.ORCID 0000-0001-8459-9652
Alan Kádek *CSSB Centre for Structural Systems Biology, Deutsches Elektronen-Synchrotron DESY & Leibniz Institute of Virology (LIV), Notkestraße 85, Hamburg, Germany.ORCID 0000-0002-7953-5870
Ignacio L B MunguiraMoleculaire Biofysica, Zernike Instituut, Rijksuniversiteit Groningen, Groningen, Netherlands.
Laura Soria-MartinezInstitute of Cellular Virology, ZMBE, University of Münster, Münster, Germany.
Sarah NentwichCSSB Centre for Structural Systems Biology, Deutsches Elektronen-Synchrotron DESY & Leibniz Institute of Virology (LIV), Notkestraße 85, Hamburg, Germany.
Sreedeepa SahaInstitute of Cellular Virology, ZMBE, University of Münster, Münster, Germany.
Florian ChardonInstitute of Cellular Virology, ZMBE, University of Münster, Münster, Germany.
Daniel KavanInstitute of Microbiology of the Czech Academy of Sciences, Videnska 1083, Prague, Czech Republic.ORCID 0000-0003-2693-1199
Charlotte UetrechtCSSB Centre for Structural Systems Biology, Deutsches Elektronen-Synchrotron DESY & Leibniz Institute of Virology (LIV), Notkestraße 85, Hamburg, Germany. charlotte.uetrecht@cssb-hamburg.de.ORCID 0000-0002-1991-7922
Mario SchelhaasInstitute of Cellular Virology, ZMBE, University of Münster, Münster, Germany. schelhaa@uni-muenster.de.
Wouter H RoosMoleculaire Biofysica, Zernike Instituut, Rijksuniversiteit Groningen, Groningen, Netherlands. w.h.roos@rug.nl.ORCID 0000-0002-5104-0139

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

High-risk human papillomaviruses (HPVs) cause various cancers. While type-specific prophylactic vaccines are available, additional anti-viral strategies are highly desirable. Initial HPV cell entry involves receptor-switching induced by structural capsid modifications. These modifications are initiated by interactions with cellular heparan sulphates (HS), however, their molecular nature and functional consequences remain elusive. Combining virological assays with hydrogen/deuterium exchange mass spectrometry, and atomic force microscopy, we investigate the effect of capsid-HS binding and structural activation. We show how HS-induced structural activation requires a minimal HS-chain length and simultaneous engagement of several binding sites by a single HS molecule. This engagement introduces a pincer-like force that stabilizes the capsid in a conformation with extended capsomer linkers. It results in capsid enlargement and softening, thereby likely facilitating L1 proteolytic cleavage and subsequent L2-externalization, as needed for cell entry. Our data supports the further devising of prophylactic strategies against HPV infections.

Indexed as

CapsidCapsid ProteinsHeparan SulfateMicroscopy, Atomic ForceVirus InternalizationBinding SitesHuman papillomavirus 16Human Papillomavirus VirusesHumansPapillomaviridaePapillomavirus InfectionsPolysaccharidesProtein BindingCapsid ProteinsHeparan SulfatePolysaccharides

Identifiers

PMID39572555
PMCPMC11582657

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.