Evidence map›Paper›PMID 39571614›Full record

ArticleNucleic acids research2025

The PIWI-interacting protein Gtsf1 controls the selective degradation of small RNAs in Paramecium.

Olivia Charmant, Julita Gruchota, Olivier Arnaiz, Katarzyna P Nowak, Nicolas Moisan, Coralie Zangarelli, Mireille Bétermier, Anna Anielska-Mazur, Véronique Legros, Guillaume Chevreux and 2 more

Abstract read
In one paragraph

Article in Nucleic acids research, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Olivia CharmantUniversité Paris Cité, CNRS, Institut Jacques Monod, 15 rue Hélène Brion, F-75013 Paris, France.
Julita GruchotaInstitute of Biochemistry and Biophysics Polish Academy of Sciences, Pawinskiego 5a, 02-106 Warsaw, Poland.
Olivier ArnaizUniversité Paris-Saclay, CEA, CNRS, Institute for Integrative Biology of the Cell (I2BC), 1 Avenue de la Terrasse, 91198 Gif-sur-Yvette, France.
Katarzyna P NowakInstitute of Biochemistry and Biophysics Polish Academy of Sciences, Pawinskiego 5a, 02-106 Warsaw, Poland.ORCID 0000-0003-1887-9984
Nicolas MoisanUniversité Paris Cité, CNRS, Institut Jacques Monod, 15 rue Hélène Brion, F-75013 Paris, France.
Coralie ZangarelliUniversité Paris-Saclay, CEA, CNRS, Institute for Integrative Biology of the Cell (I2BC), 1 Avenue de la Terrasse, 91198 Gif-sur-Yvette, France.
Mireille BétermierUniversité Paris-Saclay, CEA, CNRS, Institute for Integrative Biology of the Cell (I2BC), 1 Avenue de la Terrasse, 91198 Gif-sur-Yvette, France.ORCID 0000-0002-5407-6292
Anna Anielska-MazurInstitute of Biochemistry and Biophysics Polish Academy of Sciences, Pawinskiego 5a, 02-106 Warsaw, Poland.
Véronique LegrosUniversité Paris Cité, CNRS, Institut Jacques Monod, 15 rue Hélène Brion, F-75013 Paris, France.
Guillaume ChevreuxUniversité Paris Cité, CNRS, Institut Jacques Monod, 15 rue Hélène Brion, F-75013 Paris, France.ORCID 0000-0003-3452-2125
Jacek K NowakInstitute of Biochemistry and Biophysics Polish Academy of Sciences, Pawinskiego 5a, 02-106 Warsaw, Poland.ORCID 0000-0003-2569-4080
Sandra DuharcourtUniversité Paris Cité, CNRS, Institut Jacques Monod, 15 rue Hélène Brion, F-75013 Paris, France.ORCID 0000-0002-8913-8799

Funding

Agence Nationale de la Recherche ANR-18-CE12-0005Centre National de la Recherche ScientifiqueEUR G.E.N.E. ANR-17-EURE-0013Fondation de la Recherche Médicale FRM EQU202203014643LABEX Who Am I? ANR-11-LABX-0071National Science Centre, Poland 2019/32/C/NZ2/00472Polish Academy of SciencesUniversité Paris Cité ANR-18-IDEX-0001
6 · The paper itself

Abstract

Ciliates undergo developmentally programmed genome elimination, in which small RNAs direct the removal of transposable elements (TEs) during the development of the somatic nucleus. Twenty-five nucleotide scanRNAs (scnRNAs) are produced from the entire germline genome and transported to the maternal somatic nucleus, where selection of scnRNAs corresponding to germline-specific sequences is thought to take place. Selected scnRNAs then guide the elimination of TEs in the developing somatic nucleus. How germline-specific scnRNAs are selected remains to be determined. Here, we provide important mechanistic insights into the scnRNA selection pathway by identifying a Paramecium homolog of Gtsf1 as essential for the selective degradation of scnRNAs corresponding to retained somatic sequences. Consistently, we also show that Gtsf1 is localized in the maternal somatic nucleus where it associates with the scnRNA-binding protein Ptiwi09. Furthermore, we demonstrate that the scnRNA selection process is critical for genome elimination. We propose that Gtsf1 is required for the coordinated degradation of Ptiwi09-scnRNA complexes that pair with target RNA via the ubiquitin pathway, similarly to the mechanism suggested for microRNA target-directed degradation in metazoans.

Indexed as

ParameciumProtozoan ProteinsRNA-Binding ProteinsRNA, ProtozoanRNA, Small InterferingRNA StabilityCell NucleusDNA Transposable ElementsParamecium tetraureliaDNA Transposable ElementsProtozoan ProteinsRNA-Binding ProteinsRNA, ProtozoanRNA, Small Interfering

Identifiers

PMID39571614
PMCPMC11724296

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.