Evidence map›Paper›PMID 39570911›Full record

ArticlePloS one2024

The 3D dynamic visualization simulation of rice plant based on morphological structure model and the application in phenotypic calculation.

Yonghui Zhang, Yujie Zhang, Peng Zhang, Liang Tang, Xiaojun Liu, Weixing Cao, Yan Zhu

Abstract read
In one paragraph

Article in PloS one, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Yonghui ZhangSchool of Computer Engineering, Weifang University, Weifang, P. R. China.ORCID 0000-0003-3622-8237
Yujie ZhangWeifang People's Hospital, Weifang, P. R. China.
Peng ZhangSchool of Physics and Electronic Information, Weifang University, Weifang, P. R. China.
Liang TangNational Engineering and Technology Center of Information Agriculture, Nanjing Agricultural University, Nanjing, P. R. China.
Xiaojun LiuNational Engineering and Technology Center of Information Agriculture, Nanjing Agricultural University, Nanjing, P. R. China.
Weixing CaoNational Engineering and Technology Center of Information Agriculture, Nanjing Agricultural University, Nanjing, P. R. China.
Yan ZhuNational Engineering and Technology Center of Information Agriculture, Nanjing Agricultural University, Nanjing, P. R. China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The virtual crop stands as a vital content in crop model research field, and has become an indispensable tool for exploring crop phenotypes. The focal objective of this undertaking is to realize three-dimensional (3D) dynamic visualization simulations of rice individual and rice populations, as well as to predict rice phenotype using virtual rice. Leveraging our laboratory's existing research findings, we have realized 3D dynamic visualizations of rice individual and populations across various growth degree days (GDD) by integrating the synchronization relationship between the above-ground parts and the root system in rice plant. The resulting visualization effects are realistic with better predictive capability for rice morphological changes. We conducted a field experiment in Anhui Province in 2019, and obtained leaf area index data for two distinct rice cultivars at the tiller stage, jointing stage, and flowering stage. A method of segmenting leaf based on the virtual rice model is employed to predict the leaf area index. A comparative analysis between the measured and simulated leaf area index yielded relative errors spanning from 7.58% to 12.69%. Additionally, the root mean square error, the mean absolute error, and the coefficient of determination were calculated as 0.56, 0.55, and 0.86, respectively. All the evaluation criteria indicate a commendable level of accuracy. These advancements provide both technical and modeling support for the development of virtual crops and the prediction of crop phenotypes.

Indexed as

OryzaPhenotypePlant LeavesComputer SimulationCrops, AgriculturalImaging, Three-DimensionalPlant Roots

Identifiers

PMID39570911
PMCPMC11581221

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.