Evidence map›Paper›PMID 39567878›Full record

ArticleBMC genomics2024

Genome-wide identification of heterotrimeric G protein genes in castor (Ricinus communis L.) and expression patterns under salt stress.

Mubo Fan, Jiayu Li, Tongjie Zhang, Hongyan Huo, Shiyou Lü, Zhibiao He, Xiaoyu Wang, Jixing Zhang

Abstract read
In one paragraph

Article in BMC genomics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Mubo FanCollege of Life Science and Food Engineering, Inner Mongolia Minzu University, Tongliao, 028000, China.
Jiayu LiCollege of Life Science and Food Engineering, Inner Mongolia Minzu University, Tongliao, 028000, China.
Tongjie ZhangInner Mongolia Collaborative Innovation Center for Castor Industry, Tongliao, 028000, China.
Hongyan HuoCollege of Life Science and Food Engineering, Inner Mongolia Minzu University, Tongliao, 028000, China.
Shiyou LüInner Mongolia Collaborative Innovation Center for Castor Industry, Tongliao, 028000, China.
Zhibiao HeInner Mongolia Collaborative Innovation Center for Castor Industry, Tongliao, 028000, China.
Xiaoyu WangCollege of Life Science and Food Engineering, Inner Mongolia Minzu University, Tongliao, 028000, China.
Jixing ZhangCollege of Life Science and Food Engineering, Inner Mongolia Minzu University, Tongliao, 028000, China. zjx-711209@163.com.

Funding

Inner Mongolia Collaborative Innovation Center for Castor Industry MDK2023083National Natural Science Foundation of China 31760399
6 · The paper itself

Abstract

backgroundHeterotrimeric G proteins are crucial signaling molecules involved in cell signaling, plant development, and stress response. However, the genome-wide identification and analysis of G proteins in castor (Ricinus communis L.) have not been researched.

resultsIn this study, RcG-protein genes were identified using a sequence alignment method and analyzed by bioinformatics and expression analysis in response to salt stress. The results showed that a total of 9 G-protein family members were identified in the castor genome, which were classified into three subgroups, with the majority of RcG-proteins showing homology to soybean G-protein members. The promoter regions of all RcG-protein genes contained antioxidant response elements and ABA-responsive elements. Go enrichment analysis displayed that RcG-protein genes were involved in the G protein-coupled receptor signaling pathway, regulation of root development, and response to the bacterium. Real-time PCR showed varying responses of all RcG-protein genes to salt stress. RcGB1 was notably expressed in both roots and leaves under salt treatment, suggesting that it may be an essential gene associated with salt tolerance in the castor.

conclusionsThis study offers a theoretical framework for exploring G-protein function and presents potential genetic assets for improving crop resilience through genetic enhancement.

Indexed as

Gene Expression Regulation, PlantHeterotrimeric GTP-Binding ProteinsSalt StressGene Expression ProfilingGenome, PlantPhylogenyPlant ProteinsRicinusHeterotrimeric GTP-Binding ProteinsPlant ProteinsBioinformaticsGene expression analysisHeterotrimeric G proteinRicinus communisSalt stress

Identifiers

PMID39567878
PMCPMC11577925

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.