Evidence map›Paper›PMID 39567537›Full record

ArticleNature communications2024

Conserved effector families render Phytophthora species vulnerable to recognition by NLR receptors in nonhost plants.

Soohyun Oh, Myung-Shin Kim, Hui Jeong Kang, Taewon Kim, Junhyeong Kong, Doil Choi

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
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  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Soohyun Oh *Plant Immunity Research Center, Seoul National University, Seoul, 08826, Republic of Korea.ORCID 0000-0003-0003-588X
Myung-Shin Kim *Department of Biosciences and Bioinformatics, Myongji University, Yongin, 17058, Republic of Korea.ORCID 0000-0002-5967-4347
Hui Jeong KangPlant Immunity Research Center, Seoul National University, Seoul, 08826, Republic of Korea.ORCID 0000-0002-1347-8965
Taewon KimPlant Immunity Research Center, Seoul National University, Seoul, 08826, Republic of Korea.ORCID 0009-0008-3360-3103
Junhyeong KongPlant Immunity Research Center, Seoul National University, Seoul, 08826, Republic of Korea.ORCID 0009-0000-4135-8496
Doil ChoiPlant Immunity Research Center, Seoul National University, Seoul, 08826, Republic of Korea. doil@snu.ac.kr.ORCID 0000-0002-4366-3627

Funding

National Research Foundation of Korea (NRF) 2018R1A5A1023599National Research Foundation of Korea (NRF) 2022R1C1C2011450National Research Foundation of Korea (NRF) RS-2024-00333225National Research Foundation of Korea (NRF) RS-2024-00333777
6 · The paper itself

Abstract

NLR receptor is suggested as a component of plant nonhost resistance (NHR). However, the evolutionary process of how plants develop receptors for recognizing broad-spectrum pathogens is still elusive. Here, we observe that multiple RxLR effector families including 12 reported avirulence effectors of Phytophthora infestans are broadly conserved across the Phytophthora species. We select 69 effectors distributed into 8 families from 6 Phytophthora species, and confirm that 60.87% of the tested effectors are recognized by Solanum NLRs according to their defined families. Furthermore, we confirm that expression of R1, R8, and Rpi-amr1 confer broad-spectrum resistance against multiple Phytophthora species. Combined results suggest that conserved effector families of Phytophthora species allow solanaceous plants to recognize broad-spectrum pathogens via NLRs that originally reported to recognize P. infestans. Thus, NLR-mediated recognition would contribute to NHR against pathogens that possess similar repertoires of effectors. Moreover, this homology-based approach would be applicable to other plant-pathogen systems and provide an alternative strategy of genetic mapping to identify functional NLRs against various crop-threatening pathogens.

Indexed as

NLR ProteinsPhytophthoraPlant DiseasesDisease ResistanceHost-Pathogen InteractionsPhylogenyPhytophthora infestansPlant ImmunityPlant ProteinsSolanumNLR ProteinsPlant Proteins

Identifiers

PMID39567537
PMCPMC11579510

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.