Evidence map›Paper›PMID 39566816›Full record

ArticleMetabolic engineering2025

Unraveling productivity-enhancing genes in Chinese hamster ovary cells via CRISPR activation screening using recombinase-mediated cassette exchange system.

Minhye Baek, Che Lin Kim, Su Hyun Kim, Karen Julie la Cour Karottki, Hooman Hefzi, Lise Marie Grav, Lasse Ebdrup Pedersen, Nathan E Lewis, Jae Seong Lee, Gyun Min Lee

Abstract read
In one paragraph

Article in Metabolic engineering, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Minhye BaekDepartment of Biological Sciences, KAIST, Daejeon, 34141, Republic of Korea.
Che Lin KimThe Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Lyngby, Denmark.
Su Hyun KimDepartment of Biological Sciences, KAIST, Daejeon, 34141, Republic of Korea.
Karen Julie la Cour KarottkiDepartments of Pediatrics and Bioengineering, University of California, San Diego, USA.
Hooman HefziDepartments of Pediatrics and Bioengineering, University of California, San Diego, USA.
Lise Marie GravThe Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Lyngby, Denmark.
Lasse Ebdrup PedersenThe Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Lyngby, Denmark.
Nathan E LewisDepartments of Pediatrics and Bioengineering, University of California, San Diego, USA.
Jae Seong LeeDepartment of Molecular Science and Technology, Ajou University, Suwon, 16499, Republic of Korea. Electronic address: jaeseonglee@ajou.ac.kr.
Gyun Min LeeDepartment of Biological Sciences, KAIST, Daejeon, 34141, Republic of Korea. Electronic address: gyunminlee@kaist.ac.kr.

Funding

Unraveling the mammalian secretory pathway through systems biology and algorithm developmentR35GM119850 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI LEWIS, NATHAN ENOCH · 2016 to 2025
$4.3M
NIGMS NIH HHS R35 GM119850
6 · The paper itself

Abstract

Chinese hamster ovary (CHO) cells, which are widely used for therapeutic protein production, have been genetically manipulated to enhance productivity. Nearly half of the genes in CHO cells are silenced, which are promising targets for CHO cell engineering. To identify novel gene targets among the silenced genes that can enhance productivity, we established a genome-wide clustered regularly interspaced short palindromic repeats activation (CRISPRa) screening platform for bispecific antibody (bsAb)-producing CHO (CHO-bsAb) cells with 110,979 guide RNAs (gRNAs) targeting 13,812 silenced genes using a virus-free recombinase-mediated cassette exchange-based gRNA integration method. Using this platform, we performed a fluorescence-activated cell sorting-based cold-capture assay to isolate cells with high fluorescence intensity, which is indicative of high specific bsAb productivity (q

Indexed as

CricetulusCRISPR-Cas SystemsAnimalsAntibodies, BispecificCHO CellsCricetinaeRecombinasesAntibodies, BispecificRecombinasesBispecific antibodyChinese hamster ovaryCRISPRgRNASyce3Therapeutic

Identifiers

PMID39566816
PMCPMC12212893

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.