Evidence map›Paper›PMID 39565846›Full record

ArticleScience advances2024

Structure of the human TSC:WIPI3 lysosomal recruitment complex.

Charles Bayly-Jones, Christopher J Lupton, Laura D'Andrea, Yong-Gang Chang, Gareth D Jones, Joel R Steele, Hari Venugopal, Ralf B Schittenhelm, Michelle L Halls, Andrew M Ellisdon

Abstract read
In one paragraph

Article in Science advances, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Charles Bayly-JonesCancer Program, Biomedicine Discovery Institute, Monash University, Clayton, VIC 3800, Australia.ORCID 0000-0002-7573-7715
Christopher J LuptonCancer Program, Biomedicine Discovery Institute, Monash University, Clayton, VIC 3800, Australia.ORCID 0000-0002-4617-4853
Laura D'AndreaCancer Program, Biomedicine Discovery Institute, Monash University, Clayton, VIC 3800, Australia.ORCID 0000-0001-5765-8717
Yong-Gang ChangCancer Program, Biomedicine Discovery Institute, Monash University, Clayton, VIC 3800, Australia.
Gareth D JonesCancer Program, Biomedicine Discovery Institute, Monash University, Clayton, VIC 3800, Australia.ORCID 0000-0002-8063-2117
Joel R SteeleMonash Proteomics and Metabolomics Facility, Monash University, Clayton, VIC 3800, Australia.ORCID 0000-0002-3070-9761
Hari VenugopalRamaciotti Centre for Cryo-Electron Microscopy, Monash University, Clayton, VIC 3800, Australia.ORCID 0000-0001-5230-2973
Ralf B SchittenhelmMonash Proteomics and Metabolomics Facility, Monash University, Clayton, VIC 3800, Australia.ORCID 0000-0001-8738-1878
Michelle L HallsDrug Discovery Biology Theme, Monash Institute of Pharmaceutical Sciences, Monash University, Parkville, VIC 3052, Australia.ORCID 0000-0001-8555-8959
Andrew M EllisdonCancer Program, Biomedicine Discovery Institute, Monash University, Clayton, VIC 3800, Australia.ORCID 0000-0002-2248-9914

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Tuberous sclerosis complex (TSC) is targeted to the lysosomal membrane, where it hydrolyzes RAS homolog-mTORC1 binding (RHEB) from its GTP-bound to GDP-bound state, inhibiting mechanistic target of rapamycin complex 1 (mTORC1). Loss-of-function mutations in TSC cause TSC disease, marked by excessive tumor growth. Here, we overcome a high degree of continuous conformational heterogeneity to determine the 2.8-Å cryo-electron microscopy (cryo-EM) structure of the complete human TSC in complex with the lysosomal recruitment factor WD repeat domain phosphoinositide-interacting protein 3 (WIPI3). We discover a previously undetected amino-terminal TSC1 HEAT repeat dimer that clamps onto a single TSC wing and forms a phosphatidylinositol phosphate (PIP)-binding pocket, which specifically binds monophosphorylated PIPs. These structural advances provide a model by which WIPI3 and PIP-signaling networks coordinate to recruit TSC to the lysosomal membrane to inhibit mTORC1. The high-resolution TSC structure reveals previously unrecognized mutational hotspots and uncovers crucial insights into the mechanisms of TSC dysregulation in disease.

Indexed as

Cryoelectron MicroscopyLysosomesBinding SitesHumansMechanistic Target of Rapamycin Complex 1Membrane ProteinsModels, MolecularMutationPhosphatidylinositol PhosphatesProtein BindingProtein ConformationTuberous SclerosisTuberous Sclerosis Complex 1 ProteinMechanistic Target of Rapamycin Complex 1Membrane ProteinsPhosphatidylinositol PhosphatesTSC1 protein, humanTuberous Sclerosis Complex 1 Protein

Identifiers

PMID39565846
PMCPMC11578170

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.