Evidence map›Paper›PMID 39565310›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2024

Agonist activation to open the Gα subunit of the GPCR-G protein precoupled complex defines functional agonist activation of TAS2R5.

Moon Young Yang, Khuong Duy Mac, Hannah R Strzelinski, Samantha A Hoffman, Donghwa Kim, Soo-Kyung Kim, Judith Su, Stephen B Liggett, William A Goddard

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
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  3. Review
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  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Moon Young Yang *Materials and Process Simulation Center, California Institute of Technology, Pasadena, CA 91125.ORCID 0000-0003-4436-8010
Khuong Duy Mac *Department of Biomedical Engineering, The University of Arizona, Tucson, AZ 85721.
Hannah R StrzelinskiDepartment of Medicine, University of South Florida Morsani College of Medicine, Tampa, FL 33612.ORCID 0000-0002-8461-7061
Samantha A HoffmanDepartment of Medicine, University of South Florida Morsani College of Medicine, Tampa, FL 33612.
Donghwa KimDepartment of Medicine, University of South Florida Morsani College of Medicine, Tampa, FL 33612.ORCID 0000-0002-8994-8513
Soo-Kyung KimMaterials and Process Simulation Center, California Institute of Technology, Pasadena, CA 91125.ORCID 0000-0002-4498-5441
Judith SuDepartment of Biomedical Engineering, Wyant College of Optical Sciences, The University of Arizona, Tucson, AZ 85721.ORCID 0000-0002-1005-1755
Stephen B LiggettDepartment of Medicine, University of South Florida Morsani College of Medicine, Tampa, FL 33612.ORCID 0000-0002-0128-3669
William A GoddardMaterials and Process Simulation Center, California Institute of Technology, Pasadena, CA 91125.ORCID 0000-0003-0097-5716

Funding

Project 4 - OGR1- and TSPO- dependent mechanisms mediated by benzodiazepines affecting ASM contractionP01HL114471 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI LIGGETT, STEPHEN B · 2013 to 2023
$23.9M
Characterization of biased airway smooth muscle TAS2R agonists for treating asthmaR01HL155532 · NHLBI · UNIVERSITY OF SOUTH FLORIDA · PI LIGGETT, STEPHEN B · 2021 to 2024
$2.2M
Label-free single molecule detection for basic science and translational medicineR35GM137988 · NIGMS · UNIVERSITY OF ARIZONA · PI SU, JUDITH · 2020 to 2024
$1.8M
HHS | NIH (NIH) R01HL155532HHS | NIH (NIH) R35GM137988NHLBI NIH HHS P01 HL114471NHLBI NIH HHS R01 HL155532NIGMS NIH HHS R35 GM137988
6 · The paper itself

Abstract

G protein-coupled receptors (GPCRs) regulate multiple cellular responses and represent highly successful therapeutic targets. The mechanisms by which agonists activate the G protein are unclear for many GPCR families, including the bitter taste receptors (TAS2Rs). We ascertained TAS2R5 properties by live cell-based functional assays, direct binding affinity measurements using optical resonators, and atomistic molecular dynamics simulations. We focus on three agonists that exhibit a wide range of signal transduction in cells despite comparable ligand-receptor binding energies derived from direct experiment and computation. Metadynamics simulations revealed that the critical barrier to activation is ligand-induced opening of the G protein between the α-helical (AH) and Ras-like domains of Gα subunit from a precoupled TAS2R5-G protein state to the fully activated state. A moderate agonist opens the AH-Ras cleft from 22 Å to 31 Å with an energy gain of -4.8 kcal mol

Indexed as

Molecular Dynamics SimulationReceptors, G-Protein-CoupledGTP-Binding Protein alpha SubunitsHEK293 CellsHumansLigandsProtein BindingSignal TransductionTaste Receptors, Type 2GTP-Binding Protein alpha SubunitsLigandsReceptors, G-Protein-CoupledTaste Receptors, Type 2airway smooth musclebitter taste receptorFLOWERG protein-coupled receptormetadynamics

Identifiers

PMID39565310
PMCPMC11621838

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.