Evidence map›Paper›PMID 39565066›Full record

ArticleProtein science : a publication of the Protein Society2024

Membrane tension-dependent conformational change of Isoleucine 106 of loop B diminishes water permeability in FaPIP2;1.

Agustín Caviglia, Nicolás Espinoza-Muñoz, Juan José Alvear-Arias, Luciano Galizia, Florencia Guastaferri, Rosario Zimmermann, Lorena Sigaut, Gabriela Amodeo, Carlos González, Marcelo Ozu and 1 more

Erratum issuedAbstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors.

Agustín CavigliaDepartamento de Biodiversidad y Biología Experimental, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Buenos Aires, Argentina.ORCID 0009-0003-7405-8133
Nicolás Espinoza-MuñozCentro Interdisciplinario de Neurociencias de Valparaíso (CINV), Chile.ORCID 0000-0002-1039-634X
Juan José Alvear-AriasDepartamento de Biodiversidad y Biología Experimental, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Buenos Aires, Argentina.ORCID 0000-0003-2536-8568
Luciano GaliziaDepartamento de Biodiversidad y Biología Experimental, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Buenos Aires, Argentina.ORCID 0000-0002-0716-736X
Florencia GuastaferriDepartamento de Biodiversidad y Biología Experimental, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Buenos Aires, Argentina.ORCID 0009-0008-1394-2618
Rosario ZimmermannDepartamento de Biodiversidad y Biología Experimental, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Buenos Aires, Argentina.ORCID 0009-0003-4163-3963
Lorena SigautDepartamento de Física, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Buenos Aires, Argentina.ORCID 0000-0001-9417-9600
Gabriela AmodeoDepartamento de Biodiversidad y Biología Experimental, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Buenos Aires, Argentina.ORCID 0000-0003-3350-4750
Carlos GonzálezMillennium Nucleus in NanoBioPhysics (NNBP), Universidad San Sebastián, Santiago, Chile.
Marcelo OzuDepartamento de Biodiversidad y Biología Experimental, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Buenos Aires, Argentina.ORCID 0000-0002-8386-3738
José Antonio GarateMillennium Nucleus in NanoBioPhysics (NNBP), Universidad San Sebastián, Santiago, Chile.ORCID 0000-0002-8345-968X

Funding

Agencia Nacional de Investigación y Desarrollo (ANPCYT, MINCYT)Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET) PIP2021-202311220200100610COFondo Nacional de Desarrollo Científico y Tecnológico (FONDECYT) 1221260Fondo para la Investigación Científica y Tecnológica (FONCYT) PICT20-1438Fondo para la Investigación Científica y Tecnológica (FONCYT) PICT2017-0368Millennium Science Initiative Program (ICM-ANID) NCN2021_021Programa de Apoyo a Centros con Financiamiento Basal de ANID FB210008Universidad de Buenos Aires (UBACYT) 20020170200049BAUniversidad de Buenos Aires (UBACYT) 20020190200141BAUniversidad de Buenos Aires (UBACYT) 20020220100138BA
6 · The paper itself

Abstract

Aquaporins (AQPs) are membrane proteins specialized in facilitating water transport across membranes. Mechanical stress is one of the various stimuli that regulate AQPs. Briefly, there are several studies that report a decrease in permeability upon an increase in membrane tension. However, the molecular details of this mechanosensitive (MS) response are still a matter of debate. Our work attempts to close that gap in knowledge by providing evidence of a conformational change that occurs inside the pore of the strawberry aquaporin FaPIP2;1. Via osmotic shock experiments and molecular dynamics (MD) simulations, we found that a residue of loop B, I106, is key to the blocking of the permeation pathway and such a change is almost exclusively found under membrane tensile stress. In detail, osmotic shock experiments exhibited a nonlinear increment in water fluxes for increasing osmolarities, evidencing a decrease in the FaPIP2;1 permeability. MD simulations under membrane tension showed the same trend, with a significant increase in states with a low water permeability. The latter was correlated with a conformational change in I106 that generates a permeation barrier of around 18 kJ mol

Indexed as

AquaporinsMolecular Dynamics SimulationWaterIsoleucinePermeabilityPlant ProteinsProtein ConformationAquaporinsIsoleucinePlant ProteinsWateraquaporinsmechanosensitivitymolecular dynamicsosmotic permeabilitysingle filewater channel

Identifiers

PMID39565066
PMCPMC11577455

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.