Evidence map›Paper›PMID 39563414›Full record

ArticleVirology journal2024

SARS-CoV-2 surveillance in captive animals at the belo horizonte zoo, Minas Gerais, Brazil.

Anisleidy Pérez Castillo, João Victor Oliveira Miranda, Paula Luize Camargos Fonseca, Rennan Garcias Moreira, Luiza Campos Guerra de Araújo E Santos, Daniel Costa Queiroz, Diego Menezes Bonfim, Carlyle Mendes Coelho, Paula Cristina Senra Lima, Rafael Otávio Cançado Motta and 3 more

Abstract read
In one paragraph

Article in Virology journal, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Anisleidy Pérez CastilloDepartamento de Parasitologia, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte, Minas Gerais, Brazil.
João Victor Oliveira MirandaLaboratório de Biologia Integrativa, Departamento de Genética, Ecologia E Evolução, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte, Minas Gerais, Brazil.
Paula Luize Camargos FonsecaLaboratório de Biologia Integrativa, Departamento de Genética, Ecologia E Evolução, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte, Minas Gerais, Brazil.
Rennan Garcias MoreiraCentro de Laboratórios Multiusuários, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte, Minas Gerais, Brazil.
Luiza Campos Guerra de Araújo E SantosLaboratório de Biologia Integrativa, Departamento de Genética, Ecologia E Evolução, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte, Minas Gerais, Brazil.
Daniel Costa QueirozLaboratório de Biologia Integrativa, Departamento de Genética, Ecologia E Evolução, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte, Minas Gerais, Brazil.
Diego Menezes BonfimLaboratório de Biologia Integrativa, Departamento de Genética, Ecologia E Evolução, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte, Minas Gerais, Brazil.
Carlyle Mendes CoelhoFundação de Parques Municipais E Zoobotânica - FPMZB, Belo Horizonte, Minas Gerais, Brazil.
Paula Cristina Senra LimaFundação de Parques Municipais E Zoobotânica - FPMZB, Belo Horizonte, Minas Gerais, Brazil.
Rafael Otávio Cançado MottaFundação de Parques Municipais E Zoobotânica - FPMZB, Belo Horizonte, Minas Gerais, Brazil.
Herlandes Penha TinocoFundação de Parques Municipais E Zoobotânica - FPMZB, Belo Horizonte, Minas Gerais, Brazil.
Júlia Angélica Gonçalves da SilveiraLaboratório de PROTOVET, Departamento de Medicina Veterinária Preventiva, Escola de Veterinária da Universidade Federal de Minas Gerais, Belo Horizonte, Minas Gerais, Brazil. jangelicags@gmail.com.
Renato Santana AguiarLaboratório de Biologia Integrativa, Departamento de Genética, Ecologia E Evolução, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte, Minas Gerais, Brazil. santanarnt@gmail.com.

Funding

CAPES 001CNPq 315592/2021-4FAPEMIG BPD-00820-22FINEP 0494/20 01.20.0026.00INCT-One CNPq 405786/2022-0Instituto Todos pela Saúde - ITpS Chamada 01/2021 - C1294Rede Corona-ômica BR MCTI/FINEP affiliated with RedeVírus/MCTI 1227/21
6 · The paper itself

Abstract

backgroundThe pandemic caused by SARS-CoV-2 has not only affected humans but also raised concerns about its transmission to wild animals, potentially creating natural reservoirs. Understanding these dynamics is critical for preventing future pandemics and developing control strategies. This study aims to investigate the presence of SARS-CoV-2 in wild mammals at the Belo Horizonte Zoo in Brazil, analyzing the virus's evolution and zoonotic potential.

methodsThe study was conducted at the Belo Horizonte Zoo, Minas Gerais, Brazil, covering a diverse population of mammals. Oropharyngeal, rectal, and nasal swabs were collected from 47 captive animals between November 2021 and March 2023. SARS-CoV-2 presence was determined using RT-PCR, and positive samples were sequenced for phylogenetic analysis. Consensus genomes were classified using Pangolin and NextClade tools, and a maximum likelihood phylogeny was inferred using IQ-Tree.

resultsOf the 47 animals tested, nine (19.1%) were positive for SARS-CoV-2. Positive samples included rectal, oropharyngeal, and nasal swabs, with the highest positivity in rectal samples. Three genomes were successfully sequenced, revealing two variants: VOC Alpha in a maned wolf (Chrysocyon brachyurus) and a fallow deer (Dama dama), and VOC Omicron in a western lowland gorilla (Gorilla gorilla gorilla). Phylogenetic analysis indicated potential human-to-animal transmission, with animal genomes clustering close to human samples from the same region.

conclusionsThis study highlights the presence of SARS-CoV-2 in various wild mammal species at the Belo Horizonte Zoo, emphasizing the virus's zoonotic potential and the complexity of interspecies transmission. The detection of different variants suggests ongoing viral evolution and adaptation in new hosts. Continuous monitoring and genomic surveillance of SARS-CoV-2 in wildlife are essential for understanding its transmission dynamics and preventing future zoonotic outbreaks. These findings underscore the need for integrated public health strategies that include wildlife monitoring to mitigate the risks posed by emerging infectious diseases.

Indexed as

Animals, ZooCOVID-19Genome, ViralPhylogenySARS-CoV-2AnimalsAnimals, WildBrazilHumansMammalsZoonosesAnimal surveillanceEpidemiologyGenomic analysisMammalsSARS-CoV-2Viral adaptationWildlifeZoonotic transmissionZoos

Identifiers

PMID39563414
PMCPMC11575034

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.