Evidence map›Paper›PMID 39561715›Full record

ArticleCell reports methods2024

Accelerated production of human epithelial organoids in a miniaturized spinning bioreactor.

Shicheng Ye, Ary Marsee, Gilles S van Tienderen, Mohammad Rezaeimoghaddam, Hafsah Sheikh, Roos-Anne Samsom, Eelco J P de Koning, Sabine Fuchs, Monique M A Verstegen, Luc J W van der Laan and 5 more

Abstract read
In one paragraph

Article in Cell reports methods, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Guiding Principles: Reporting Elements for Gastrointestinal Organoid Research.Cellular and molecular gastroenterology and hepatology · 2026
    Guideline
  2. Article
  3. Review
  4. Article
  5. Article
  6. Organoids for disease modeling and treatment: state-of-the-art.Experimental hematology & oncology · 2026
    Review
  7. Review
  8. Review
  9. Advances in Cytotoxicity Testing: From In Vitro Assays to In Silico Models.International journal of molecular sciences · 2025
    Review
  10. Review
  11. Review
  12. Biomedical applications of organoids derived from the digestive system.Frontiers in cell and developmental biology · 2025
    Review
  13. Organoid scaffold materials: research and application.Frontiers in bioengineering and biotechnology · 2025
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Shicheng YeDepartment of Clinical Sciences, Faculty of Veterinary Medicine, Utrecht University, Uppsalalaan 8, Utrecht 3584 CT, the Netherlands.
Ary MarseeDepartment of Clinical Sciences, Faculty of Veterinary Medicine, Utrecht University, Uppsalalaan 8, Utrecht 3584 CT, the Netherlands.
Gilles S van TienderenDepartment of Clinical Sciences, Faculty of Veterinary Medicine, Utrecht University, Uppsalalaan 8, Utrecht 3584 CT, the Netherlands.
Mohammad RezaeimoghaddamDepartment of Biomedical Engineering, Eindhoven University of Technology, Eindhoven 5600 MB, the Netherlands.
Hafsah SheikhDepartment of Clinical Sciences, Faculty of Veterinary Medicine, Utrecht University, Uppsalalaan 8, Utrecht 3584 CT, the Netherlands.
Roos-Anne SamsomDepartment of Clinical Sciences, Faculty of Veterinary Medicine, Utrecht University, Uppsalalaan 8, Utrecht 3584 CT, the Netherlands.
Eelco J P de KoningDepartment of Internal Medicine, Leiden University Medical Center, P.O. Box 9600, Leiden 2300 RC, the Netherlands; Hubrecht Institute, KNAW (Royal Netherlands Academy of Arts and Sciences), Utrecht 3584 CT, the Netherlands.
Sabine FuchsDepartment of Metabolic Diseases, Wilhelmina Children's Hospital, University Medical Center Utrecht, Lundlaan 6, Utrecht 3584 EA, the Netherlands.
Monique M A VerstegenDepartment of Surgery, Erasmus MC Transplant Institute, University Medical Center Rotterdam, P.O. Box 2040, Rotterdam 3000 CA, the Netherlands.
Luc J W van der LaanDepartment of Surgery, Erasmus MC Transplant Institute, University Medical Center Rotterdam, P.O. Box 2040, Rotterdam 3000 CA, the Netherlands.
Frans van de VosseDepartment of Biomedical Engineering, Eindhoven University of Technology, Eindhoven 5600 MB, the Netherlands.
Jos MaldaDepartment of Clinical Sciences, Faculty of Veterinary Medicine, Utrecht University, Uppsalalaan 8, Utrecht 3584 CT, the Netherlands; Department of Orthopedics, University Medical Center Utrecht, Utrecht University, Utrecht 3584 CX, the Netherlands.
Keita ItoDepartment of Biomedical Engineering, Eindhoven University of Technology, Eindhoven 5600 MB, the Netherlands.
Bart SpeeDepartment of Clinical Sciences, Faculty of Veterinary Medicine, Utrecht University, Uppsalalaan 8, Utrecht 3584 CT, the Netherlands.
Kerstin SchneebergerDepartment of Clinical Sciences, Faculty of Veterinary Medicine, Utrecht University, Uppsalalaan 8, Utrecht 3584 CT, the Netherlands. Electronic address: k.schneeberger@uu.nl.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Conventional static culture of organoids necessitates weekly manual passaging and results in nonhomogeneous exposure of organoids to nutrients, oxygen, and toxic metabolites. Here, we developed a miniaturized spinning bioreactor, RPMotion, specifically optimized for accelerated and cost-effective culture of epithelial organoids under homogeneous conditions. We established tissue-specific RPMotion settings and standard operating protocols for the expansion of human epithelial organoids derived from the liver, intestine, and pancreas. All organoid types proliferated faster in the bioreactor (5.2-fold, 3-fold, and 4-fold, respectively) compared to static culture while keeping their organ-specific phenotypes. We confirmed that the bioreactor is suitable for organoid establishment directly from biopsies and for long-term expansion of liver organoids. Furthermore, we showed that after accelerated expansion, liver organoids can be differentiated into hepatocyte-like cells in the RPMotion bioreactor. In conclusion, this miniaturized bioreactor enables work-, time-, and cost-efficient organoid culture, holding great promise for organoid-based fundamental and translational research and development.

Indexed as

BioreactorsOrganoidsCell Culture TechniquesCell DifferentiationCell ProliferationCells, CulturedEpithelial CellsHepatocytesHumansLiverMiniaturizationPancreasbioreactorCP: BiotechnologyCP: Stem cellorganoidRPMotionstem cellsuspension culture

Identifiers

PMID39561715
PMCPMC11705766

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.