Evidence map›Paper›PMID 39560853›Full record

ArticleMolecular biology reports2024

Molecular interplay between the upregulated levels of Sad1 and UNC84 Domain Containing 2 (SUN2) and gene expression in medulloblastoma cells.

Angeles C Tecalco-Cruz, Marina Macías-Silva, Marcela Sosa-Garrocho, Augusto César Poot-Hernández, Carlos Alberto Peralta-Alvarez, Josué O Ramírez-Jarquín, Carlo César Cortes-González, Leslie Figueroa-Rivera, César López-Camarillo

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In one paragraph

Article in Molecular biology reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Angeles C Tecalco-CruzPosgrado en Ciencias Genómicas, Universidad Autónoma de La Ciudad de México (UACM), 03100, Mexico City, CDMX, Mexico. angeles.tecalco@uacm.edu.mx.
Marina Macías-SilvaInstituto de Fisiología Celular, Universidad Nacional Autónoma de México (UNAM), 04510, Mexico City, CDMX, Mexico.
Marcela Sosa-GarrochoInstituto de Fisiología Celular, Universidad Nacional Autónoma de México (UNAM), 04510, Mexico City, CDMX, Mexico.
Augusto César Poot-HernándezInstituto de Fisiología Celular. Universidad Nacional Autónoma de México, Unidad de Bioinformática y Manejo de la Información, CDMX, Mexico.
Carlos Alberto Peralta-AlvarezInstituto de Fisiología Celular. Universidad Nacional Autónoma de México, Unidad de Bioinformática y Manejo de la Información, CDMX, Mexico.
Josué O Ramírez-JarquínInstituto de Fisiología Celular, Universidad Nacional Autónoma de México (UNAM), 04510, Mexico City, CDMX, Mexico.
Carlo César Cortes-GonzálezUnidad de Investigación Biomédica en Cáncer, INCAN-IIB, 14080, Mexico City, CDMX, Mexico.
Leslie Figueroa-RiveraPosgrado en Ciencias Genómicas, Universidad Autónoma de La Ciudad de México (UACM), 03100, Mexico City, CDMX, Mexico.
César López-CamarilloPosgrado en Ciencias Genómicas, Universidad Autónoma de La Ciudad de México (UACM), 03100, Mexico City, CDMX, Mexico.

Funding

School of Science and Technology from the Autonomous University of Mexico City (UACM) CCyT-2024-CON-07
6 · The paper itself

Abstract

backgroundSUN2 is a nuclear envelope protein associated with the nuclear lamina and with proteins linked to nuclear export, splicing, and nucleo-cytoskeleton communication. Studies of SUN2 in cancer have been limited but have suggested that it has tumor-suppressive activity in some carcinomas. Medulloblastoma is a pediatric tumor that develops in the cerebellum and is currently classified into four molecular groups: WNT (Wingless), SHH (Sonic Hedgehog), 3, and 4. SUN2 expression profiles appear to be altered in brain cancer but have not been previously evaluated in medulloblastoma. METHODS AND

resultsThe University of Alabama at Birmingham Cancer (UALCAN) data analysis portal, Gene Expression Profiling Interactive Analysis (GEPIA), the Oncopression gene expression compendium, and the R2 genomics analysis and visualization platform were used to analyze SUN2 expression in cancer, which was found to vary by cancer type; in particular, SUN2 expression was found to be upregulated in medulloblastoma. We also explored the effects of reduced SUN2 protein levels (by RNA interference) on gene expression profiles using a cDNA microarray in DAOY medulloblastoma-derived cells. We found that SUN2 protein is upregulated in medulloblastoma, mainly in the SHH group, which correlates with poor survival. Furthermore, the reduced SUN2 expression in medulloblastoma cells is associated with the downregulation of the expression of other genes, including members of the bitter taste-sensing type 2 receptor (TAS2R) family.

conclusionsThis study shows that SUN2 is upregulated in medulloblastoma-with molecular interplay in gene expression-which has group-dependent implications for medulloblastoma development. In particular, the upregulation of SUN2 is associated with a progression of the SHH group of medulloblastoma.

Indexed as

Gene Expression Regulation, NeoplasticMedulloblastomaMembrane ProteinsUp-RegulationCell Line, TumorCerebellar NeoplasmsGene Expression ProfilingHumansIntracellular Signaling Peptides and ProteinsIntracellular Signaling Peptides and ProteinsMembrane ProteinsSUN2 protein, humanGene expressionMedulloblastomaNuclear envelopeSUN2

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.