Evidence map›Paper›PMID 39556648›Full record

ArticlePLoS pathogens2024

The blast pathogen effector AVR-Pik binds and stabilizes rice heavy metal-associated (HMA) proteins to co-opt their function in immunity.

Kaori Oikawa, Koki Fujisaki, Motoki Shimizu, Takumi Takeda, Keiichiro Nemoto, Hiromasa Saitoh, Akiko Hirabuchi, Yukie Hiraka, Naomi Miyaji, Aleksandra Białas and 8 more

Abstract read
In one paragraph

Article in PLoS pathogens, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. How to frustrate a plant pathogen.The Plant journal : for cell and molecular biology · 2026
    Review
  5. Article
  6. Precision Editing of NLRS Improves Effector Recognition for Enhanced Disease Resistance.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Review
  7. Article
  8. Review
  9. Article
  10. Article
  11. Review
  12. Article
  13. Review
  14. Review
  15. Article
  16. Bioengineering a plant NLR immune receptor with a robust binding interface toward a conserved fungal pathogen effector.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors.

Kaori OikawaIwate Biotechnology Research Center, Kitakami, Iwate, Japan.
Koki FujisakiIwate Biotechnology Research Center, Kitakami, Iwate, Japan.
Motoki ShimizuIwate Biotechnology Research Center, Kitakami, Iwate, Japan.
Takumi TakedaIwate Biotechnology Research Center, Kitakami, Iwate, Japan.
Keiichiro NemotoIwate Biotechnology Research Center, Kitakami, Iwate, Japan.
Hiromasa SaitohIwate Biotechnology Research Center, Kitakami, Iwate, Japan.
Akiko HirabuchiIwate Biotechnology Research Center, Kitakami, Iwate, Japan.
Yukie HirakaIwate Biotechnology Research Center, Kitakami, Iwate, Japan.
Naomi MiyajiIwate Biotechnology Research Center, Kitakami, Iwate, Japan.
Aleksandra BiałasThe Sainsbury Laboratory, University of East Anglia, Norwich Research Park, Norwich, United Kingdom.
Thorsten LangnerThe Sainsbury Laboratory, University of East Anglia, Norwich Research Park, Norwich, United Kingdom.
Ronny KellnerThe Sainsbury Laboratory, University of East Anglia, Norwich Research Park, Norwich, United Kingdom.
Tolga O BozkurtDepartment of Life Sciences, Imperial College, London, United Kingdom.
Stella CesariUniversity of Montpellier, CIRAD, INRAE, Supagro, BGPI, Montpellier, France.
Thomas KrojUniversity of Montpellier, CIRAD, INRAE, Supagro, BGPI, Montpellier, France.
Mark J BanfieldDepartment of Biochemistry and Metabolism, John Innes Centre, Norwich Research Park, Norwich, United Kingdom.
Sophien KamounThe Sainsbury Laboratory, University of East Anglia, Norwich Research Park, Norwich, United Kingdom.
Ryohei TerauchiIwate Biotechnology Research Center, Kitakami, Iwate, Japan.ORCID 0000-0002-0095-4651

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Intracellular nucleotide-binding domain and leucine-rich repeat-containing (NLR) receptors play crucial roles in immunity across multiple domains of life. In plants, a subset of NLRs contain noncanonical integrated domains that are thought to have evolved from host targets of pathogen effectors to serve as pathogen baits. However, the functions of host proteins with similarity to NLR integrated domains and the extent to which they are targeted by pathogen effectors remain largely unknown. Here, we show that the blast fungus effector AVR-Pik binds a subset of related rice proteins containing a heavy metal-associated (HMA) domain, one of the domains that has repeatedly integrated into plant NLR immune receptors. We find that AVR-Pik binding stabilizes the rice small HMA (sHMA) proteins OsHIPP19 and OsHIPP20. Knockout of OsHIPP20 causes enhanced disease resistance towards the blast pathogen, indicating that OsHIPP20 is a susceptibility gene (S-gene). We propose that AVR-Pik has evolved to bind HMA domain proteins and co-opt their function to suppress immunity. Yet this binding carries a trade-off, it triggers immunity in plants carrying NLR receptors with integrated HMA domains.

Indexed as

OryzaPlant DiseasesPlant ImmunityPlant ProteinsAscomycotaDisease ResistanceFungal ProteinsHost-Pathogen InteractionsMetals, HeavyNLR ProteinsFungal ProteinsMetals, HeavyNLR ProteinsPlant Proteins

Identifiers

PMID39556648
PMCPMC11611257

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.