Evidence map›Paper›PMID 39556435›Full record

ArticleeLife2024

A scale-invariant log-normal droplet size distribution below the critical concentration for protein phase separation.

Tommaso Amico, Samuel Toluwanimi Dada, Andrea Lazzari, Michaela Brezinova, Antonio Trovato, Michele Vendruscolo, Monika Fuxreiter, Amos Maritan

Abstract read
In one paragraph

Article in eLife, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Tommaso AmicoDepartment of Physics and Astronomy, University of Padova, Padova, Italy.
Samuel Toluwanimi DadaCentre for Misfolding Diseases, Department of Chemistry, University of Cambridge, Cambridge, United Kingdom.ORCID https://orcid.org/0000-0003-4816-9852
Andrea LazzariDepartment of Physics and Astronomy, University of Padova, Padova, Italy.ORCID https://orcid.org/0009-0000-3387-4378
Michaela BrezinovaCentre for Misfolding Diseases, Department of Chemistry, University of Cambridge, Cambridge, United Kingdom.
Antonio TrovatoDepartment of Physics and Astronomy, University of Padova, Padova, Italy.
Michele VendruscoloCentre for Misfolding Diseases, Department of Chemistry, University of Cambridge, Cambridge, United Kingdom.ORCID https://orcid.org/0000-0002-3616-1610
Monika FuxreiterDepartment of Physics and Astronomy, University of Padova, Padova, Italy.ORCID https://orcid.org/0000-0002-4463-6727
Amos MaritanDepartment of Physics and Astronomy, University of Padova, Padova, Italy.

Funding

AIRC IG 26229
6 · The paper itself

Abstract

Many proteins have been recently shown to undergo a process of phase separation that leads to the formation of biomolecular condensates. Intriguingly, it has been observed that some of these proteins form dense droplets of sizeable dimensions already below the critical concentration, which is the concentration at which phase separation occurs. To understand this phenomenon, which is not readily compatible with classical nucleation theory, we investigated the properties of the droplet size distributions as a function of protein concentration. We found that these distributions can be described by a scale-invariant log-normal function with an average that increases progressively as the concentration approaches the critical concentration from below. The results of this scaling analysis suggest the existence of a universal behaviour independent of the sequences and structures of the proteins undergoing phase separation. While we refrain from proposing a theoretical model here, we suggest that any model of protein phase separation should predict the scaling exponents that we reported here from the fitting of experimental measurements of droplet size distributions. Furthermore, based on these observations, we show that it is possible to use the scale invariance to estimate the critical concentration for protein phase separation.

Indexed as

ProteinsBiomolecular CondensatesParticle SizePhase SeparationProteinscritical exponentsnonephase transitionsphysics of living systemsprotein condensationuniversal behaviour

Identifiers

PMID39556435
PMCPMC11573347

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.