Evidence map›Paper›PMID 39545637›Full record

ArticleeLife2024

Luminal epithelial cells integrate variable responses to aging into stereotypical changes that underlie breast cancer susceptibility.

Rosalyn W Sayaman, Masaru Miyano, Eric G Carlson, Parijat Senapati, Arrianna Zirbes, Sundus F Shalabi, Michael E Todhunter, Victoria E Seewaldt, Susan L Neuhausen, Martha R Stampfer and 2 more

Abstract read
In one paragraph

Article in eLife, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Aging-associated differences in mammary tumor-initiating populations and immune evasion pathways in breast cancer.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  8. Article
  9. Article
  10. Prioritizing context-specific genetic risk mechanisms in 11 solid cancers.medRxiv : the preprint server for health sciences · 2025
    Article
  11. Ageing, immune fitness and cancer.Nature reviews. Cancer · 2025
    Review
  12. Article
  13. Article
  14. Review
  15. CD105Breast cancer research : BCR · 2025
    Article
  16. Article
  17. Epigenetic clocks and programmatic aging.Ageing research reviews · 2024
    Review
  18. Review
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Rosalyn W Sayaman *City of Hope, Department of Population Sciences, Beckman Research Institute, Duarte, United States.ORCID https://orcid.org/0000-0003-1343-0619
Masaru Miyano *City of Hope, Department of Population Sciences, Beckman Research Institute, Duarte, United States.ORCID https://orcid.org/0000-0002-1490-4743
Eric G CarlsonCity of Hope, Department of Population Sciences, Beckman Research Institute, Duarte, United States.ORCID https://orcid.org/0000-0002-2784-1729
Parijat SenapatiCity of Hope, Department of Diabetes Complications and Metabolism, Beckman Research Institute, Duarte, United States.
Arrianna ZirbesCity of Hope, Department of Population Sciences, Beckman Research Institute, Duarte, United States.ORCID https://orcid.org/0000-0002-3849-2616
Sundus F ShalabiCity of Hope, Department of Population Sciences, Beckman Research Institute, Duarte, United States.ORCID https://orcid.org/0000-0002-8440-2474
Michael E TodhunterCity of Hope, Department of Population Sciences, Beckman Research Institute, Duarte, United States.
Victoria E SeewaldtCity of Hope, Department of Population Sciences, Beckman Research Institute, Duarte, United States.
Susan L NeuhausenCity of Hope, Department of Population Sciences, Beckman Research Institute, Duarte, United States.
Martha R StampferLawrence Berkeley National Lab, Biological Sciences and Engineering, Berkeley, United States.ORCID https://orcid.org/0000-0002-3801-5086
Dustin E SchonesCity of Hope, Department of Diabetes Complications and Metabolism, Beckman Research Institute, Duarte, United States.ORCID https://orcid.org/0000-0001-7692-8583
Mark A LaBargeCity of Hope, Department of Population Sciences, Beckman Research Institute, Duarte, United States.ORCID https://orcid.org/0000-0003-2405-4719

Funding

Transgenic Mouse FacilityP30CA033572 · NCI · CITY OF HOPE/BECKMAN RESEARCH INSTITUTE · PI John Charles Williams · 1985 to 2026
$86.3M
Geriatric Oncology Research Infrastructure to Improve Clinical CareR33AG059206 · NIA · BECKMAN RESEARCH INSTITUTE/CITY OF HOPE · PI WILLIAM DALE, Heidi Diana Klepin · 2020 to 2026
$5.1M
Mechanical Phenotyping of Random Periaerolar Fine Needle Aspiration-Collected Cells for Early Breast Cancer DetectionR01EB024989 · NIBIB · UNIVERSITY OF CALIFORNIA BERKELEY · PI Mark A LaBarge, Lydia L Sohn · 2017 to 2026
$4.8M
Understanding breast cancer progression as a defect in the mechanics of tissue self-organizationU01CA244109 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI GARTNER, ZEV JORDAN, GOGA, ANDREI · 2020 to 2024
$3.0M
Involution-based biomarkers of breast cancer riskR01CA237602 · NCI · MAYO CLINIC JACKSONVILLE · PI DEGNIM, AMY C, RADISKY, DEREK C · 2020 to 2024
$2.8M
Cancer Metabolism Training ProgramT32CA221709 · NCI · BECKMAN RESEARCH INSTITUTE/CITY OF HOPE · PI David K. Ann, Victoria L. Seewaldt · 2018 to 2026
$1.8M
A systems biology approach to elucidate the biology of immune-associated outcomes in breast cancerK01CA279498 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Rosalyn Wong Sayaman · 2023 to 2026
$696k
Department of Defense BC141351Department of Defense BC181737NCI NIH HHS K01 CA279498NCI NIH HHS K01CA279498NCI NIH HHS P30 CA033572NCI NIH HHS R01 CA237602NCI NIH HHS R01CA237602NCI NIH HHS T32 CA221709NCI NIH HHS T32CA221709NCI NIH HHS U01 CA244109NCI NIH HHS U01CA244109NIA NIH HHS R33 AG059206NIA NIH HHS R33AG059206NIBIB NIH HHS R01 EB024989NIBIB NIH HHS R01EB024989United States Department of Energy DE-AC02-05CH11231
6 · The paper itself

Abstract

Effects from aging in single cells are heterogenous, whereas at the organ- and tissue-levels aging phenotypes tend to appear as stereotypical changes. The mammary epithelium is a bilayer of two major phenotypically and functionally distinct cell lineages: luminal epithelial and myoepithelial cells. Mammary luminal epithelia exhibit substantial stereotypical changes with age that merit attention because these cells are the putative cells-of-origin for breast cancers. We hypothesize that effects from aging that impinge upon maintenance of lineage fidelity increase susceptibility to cancer initiation. We generated and analyzed transcriptomes from primary luminal epithelial and myoepithelial cells from younger <30 (y)ears old and older >55 y women. In addition to age-dependent directional changes in gene expression, we observed increased transcriptional variance with age that contributed to genome-wide loss of lineage fidelity. Age-dependent variant responses were common to both lineages, whereas directional changes were almost exclusively detected in luminal epithelia and involved altered regulation of chromatin and genome organizers such as

Indexed as

AgingBreast NeoplasmsEpithelial CellsAdultAgedDisease SusceptibilityFemaleGene Expression ProfilingHumansMiddle AgedTranscriptomeagingbreast cancercancer biologycancer susceptibilitycomputational biologygene expression variancehumanlineage fidelitylumininal epitheliasystems biology

Identifiers

PMID39545637
PMCPMC11723586

What OpenQuestion holds

Textmetadata
LicenceCC0
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.