Evidence map›Paper›PMID 39543263›Full record

ArticleCommunications biology2024

Longitudinal analyses of infants' microbiome and metabolome reveal microbes and metabolites with seemingly coordinated dynamics.

Hao Wu, Douglas V Guzior, Christian Martin, Kerri A Neugebauer, Madison M Rzepka, Julie C Lumeng, Robert A Quinn, Gustavo de Los Campos

Abstract read
In one paragraph

Article in Communications biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Trial
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Hao Wu *Department of Epidemiology and Biostatistics, Michigan State University, East Lansing, MI, USA.ORCID 0000-0001-7570-190X
Douglas V Guzior *Department of Microbiology, Genetics, and Immunology, Michigan State University, East Lansing, MI, USA.ORCID 0000-0002-7019-3261
Christian MartinDepartment of Biochemistry and Molecular Biology, Michigan State University, East Lansing, MI, USA.ORCID 0000-0002-9604-6737
Kerri A NeugebauerDepartment of Plant Soil and Microbiology, Michigan State University, East Lansing, MI, USA.
Madison M RzepkaDepartment of Biochemistry and Molecular Biology, Michigan State University, East Lansing, MI, USA.
Julie C LumengDepartment of Pediatrics, University of Michigan Medical School, Ann Arbor, MI, USA.
Robert A QuinnDepartment of Biochemistry and Molecular Biology, Michigan State University, East Lansing, MI, USA. quinnrob@msu.edu.ORCID 0000-0002-9829-3256
Gustavo de Los CamposDepartment of Epidemiology and Biostatistics, Michigan State University, East Lansing, MI, USA. gustavoc@msu.edu.ORCID 0000-0001-5692-7129

Funding

The Development of Eating Behavior in Infancy: Associations with Behavior, Diet, and Growth to Age 6 yearsR01HD084163 · NICHD · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI LUMENG, JULIE C · 2015 to 2024
$6.3M
NICHD NIH HHS R01 HD084163U.S. Department of Health & Human Services | NIH | Eunice Kennedy Shriver National Institute of Child Health and Human Development (NICHD) R01HD084163
6 · The paper itself

Abstract

Population studies have shown that the infant's microbiome and metabolome undergo significant changes in early childhood. However, no previous study has investigated how diverse these changes are across subjects and whether the subject-specific dynamics of some microbes correlate with the over-time dynamics of specific metabolites. Using mixed-effects models, and data from the ABC study, we investigated the early childhood dynamics of fecal microbiome and metabolome and identified 83 amplicon sequence variants (ASVs) and 753 metabolites with seemingly coordinated trajectories. Enrichment analysis of these microbes and molecules revealed eight ASV families and 23 metabolite groups involving 1032 ASV-metabolite pairs with their presence-absence changing in a coordinated fashion. Members of the Lachnospiraceae (464/1032) and metabolites related to cholestane steroids (309/1032) dominated proportional shifts within the fecal microbiome and metabolome as infants aged.

Indexed as

FecesGastrointestinal MicrobiomeMetabolomeFemaleHumansInfantLongitudinal StudiesMale

Identifiers

PMID39543263
PMCPMC11564710

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.