Evidence map›Paper›PMID 39537924›Full record

ArticleNature2024

Structural variation in the pangenome of wild and domesticated barley.

Murukarthick Jayakodi, Qiongxian Lu, Hélène Pidon, M Timothy Rabanus-Wallace, Micha Bayer, Thomas Lux, Yu Guo, Benjamin Jaegle, Ana Badea, Wubishet Bekele and 70 more

Abstract read
In one paragraph

Article in Nature, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 90 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
90citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

90 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Research evolution of flat peach (Frontiers in plant science · 2025
    Pooled it
  2. Leaf variegation in a barley EMS mutant is controlled by two epistatic mutations.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026
    Article
  3. Review
  4. Review
  5. Article
  6. Article
  7. Article
  8. Review
  9. Review
  10. Review
  11. Structural Variation and Its Roles in Plant Genomes.Plants (Basel, Switzerland) · 2026
    Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

30 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

80 authors.

Murukarthick Jayakodi *Leibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Seeland, Germany.ORCID 0000-0003-2951-0541
Qiongxian Lu *Carlsberg Research Laboratory, Copenhagen, Denmark.ORCID 0000-0002-1358-2623
Hélène Pidon *Leibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Seeland, Germany.ORCID 0000-0002-9802-1787
M Timothy Rabanus-Wallace *Leibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Seeland, Germany.ORCID 0000-0002-4663-985X
Micha BayerThe James Hutton Institute, Dundee, UK.ORCID 0000-0003-0041-3115
Thomas LuxPGSB-Plant Genome and Systems Biology, Helmholtz Center Munich-German Research Center for Environmental Health, Neuherberg, Germany.ORCID 0000-0002-5543-1911
Yu GuoLeibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Seeland, Germany.ORCID 0000-0002-5424-5797
Benjamin JaegleDepartment of Plant and Microbial Biology, University of Zurich, Zurich, Switzerland.
Ana BadeaBrandon Research and Development Centre, Agriculture et Agri-Food Canada, Brandon, Manitoba, Canada.
Wubishet BekeleOttawa Research and Development Centre, Agriculture et Agri-Food Canada, Ottawa, Ontario, Canada.
Gurcharn S BrarFaculty of Land and Food Systems, The University of British Columbia, Vancouver, British Columbia, Canada.
Katarzyna BrauneCarlsberg Research Laboratory, Copenhagen, Denmark.ORCID 0000-0001-5390-4079
Boyke BunkDSMZ-German Collection of Microorganisms and Cell Cultures GmbH, Braunschweig, Germany.ORCID 0000-0002-8420-8161
Kenneth J ChalmersSchool of Agriculture, Food and Wine, University of Adelaide, Urrbrae, South Australia, Australia.
Brett ChapmanWestern Crop Genetics Alliance, Food Futures Institute/School of Agriculture, Murdoch University, Murdoch, Western Australia, Australia.ORCID 0000-0003-4484-2253
Morten Egevang JørgensenCarlsberg Research Laboratory, Copenhagen, Denmark.ORCID 0000-0001-6503-0495
Jia-Wu FengLeibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Seeland, Germany.ORCID 0000-0003-3737-4850
Manuel FeserLeibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Seeland, Germany.
Anne FiebigLeibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Seeland, Germany.
Heidrun GundlachPGSB-Plant Genome and Systems Biology, Helmholtz Center Munich-German Research Center for Environmental Health, Neuherberg, Germany.ORCID 0000-0002-6757-0943
Wenbin GuoThe James Hutton Institute, Dundee, UK.ORCID 0000-0002-1829-6044
Georg HabererPGSB-Plant Genome and Systems Biology, Helmholtz Center Munich-German Research Center for Environmental Health, Neuherberg, Germany.ORCID 0000-0002-6612-6939
Mats HanssonDepartment of Biology, Lund University, Lund, Sweden.ORCID 0000-0002-0168-9968
Axel HimmelbachLeibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Seeland, Germany.
Iris HoffieLeibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Seeland, Germany.
Robert E HoffieLeibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Seeland, Germany.
Haifei HuWestern Crop Genetics Alliance, Food Futures Institute/School of Agriculture, Murdoch University, Murdoch, Western Australia, Australia.
Sachiko IsobeKazusa DNA Research Institute, Kisarazu, Japan.ORCID 0000-0002-9555-5054
Patrick KönigLeibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Seeland, Germany.ORCID 0000-0002-8948-6793
Sandip M KaleCarlsberg Research Laboratory, Copenhagen, Denmark.ORCID 0000-0003-0665-5094
Nadia KamalPGSB-Plant Genome and Systems Biology, Helmholtz Center Munich-German Research Center for Environmental Health, Neuherberg, Germany.
Gabriel Keeble-GagnèreAgriculture Victoria, Department of Jobs, Precincts and Regions, Agribio, La Trobe University, Bundoora, Victoria, Australia.
Beat KellerDepartment of Plant and Microbial Biology, University of Zurich, Zurich, Switzerland.ORCID 0000-0003-2379-9225
Manuela KnauftLeibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Seeland, Germany.
Ravi KoppoluLeibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Seeland, Germany.ORCID 0000-0001-8566-9501
Simon G KrattingerPlant Science Program, Biological and Environmental Science and Engineering Division, King Abdullah University of Science and Technology (KAUST), Thuwal, Saudi Arabia.ORCID 0000-0001-6912-7411
Jochen KumlehnLeibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Seeland, Germany.ORCID 0000-0001-7080-7983
Peter LangridgeSchool of Agriculture, Food and Wine, University of Adelaide, Urrbrae, South Australia, Australia.ORCID 0000-0001-9494-400X
Chengdao LiWestern Crop Genetics Alliance, Food Futures Institute/School of Agriculture, Murdoch University, Murdoch, Western Australia, Australia.ORCID 0000-0002-9653-2700
Marina P MaroneLeibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Seeland, Germany.ORCID 0000-0003-3160-4766
Andreas MaurerInstitute of Agricultural and Nutritional Sciences, Martin Luther University Halle-Wittenberg, Halle, Germany.
Klaus F X MayerPGSB-Plant Genome and Systems Biology, Helmholtz Center Munich-German Research Center for Environmental Health, Neuherberg, Germany.ORCID 0000-0001-6484-1077
Michael MelzerLeibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Seeland, Germany.
Gary J MuehlbauerDepartment of Agronomy and Plant Genetics, University of Minnesota, St. Paul, MN, USA.ORCID 0000-0001-9320-2629
Emiko MurozukaCarlsberg Research Laboratory, Copenhagen, Denmark.
Sudharsan PadmarasuLeibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Seeland, Germany.
Dragan PerovicInstitute for Resistance Research and Stress Tolerance, Julius Kuehn-Institute (JKI), Federal Research Centre for Cultivated Plants, Quedlinburg, Germany.
Klaus PillenInstitute of Agricultural and Nutritional Sciences, Martin Luther University Halle-Wittenberg, Halle, Germany.ORCID 0000-0003-4646-6351
Pierre A PinSECOBRA Recherches, Maule, France.
Curtis J PozniakDepartment of Plant Sciences and Crop Development Centre, University of Saskatchewan, Saskatoon, Saskatchewan, Canada.ORCID 0000-0002-7536-3856
Luke RamsayThe James Hutton Institute, Dundee, UK.ORCID 0000-0003-2209-2308
Pai Rosager PedasCarlsberg Research Laboratory, Copenhagen, Denmark.
Twan RuttenLeibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Seeland, Germany.
Shun SakumaFaculty of Agriculture, Tottori University, Tottori, Japan.ORCID 0000-0003-1622-5346
Kazuhiro SatoKazusa DNA Research Institute, Kisarazu, Japan.ORCID 0000-0001-8818-5203
Danuta SchülerLeibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Seeland, Germany.
Thomas SchmutzerInstitute of Agricultural and Nutritional Sciences, Martin Luther University Halle-Wittenberg, Halle, Germany.ORCID 0000-0003-1073-6719
Uwe ScholzLeibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Seeland, Germany.ORCID 0000-0001-6113-3518
Miriam SchreiberThe James Hutton Institute, Dundee, UK.ORCID 0000-0002-3732-8822
Kenta ShirasawaKazusa DNA Research Institute, Kisarazu, Japan.ORCID 0000-0001-7880-6221
Craig SimpsonThe James Hutton Institute, Dundee, UK.ORCID 0000-0002-1723-1492
Birgitte SkadhaugeCarlsberg Research Laboratory, Copenhagen, Denmark.ORCID 0000-0001-7317-4376
Manuel SpannaglPGSB-Plant Genome and Systems Biology, Helmholtz Center Munich-German Research Center for Environmental Health, Neuherberg, Germany.ORCID 0000-0003-0701-7035
Brian J SteffensonDepartment of Plant Pathology, University of Minnesota, St. Paul, MN, USA.ORCID 0000-0001-7961-5363
Hanne C ThomsenCarlsberg Research Laboratory, Copenhagen, Denmark.
Josquin F TibbitsAgriculture Victoria, Department of Jobs, Precincts and Regions, Agribio, La Trobe University, Bundoora, Victoria, Australia.ORCID 0000-0002-4951-7540
Martin Toft Simmelsgaard NielsenCarlsberg Research Laboratory, Copenhagen, Denmark.ORCID 0000-0003-0358-434X
Corinna TrautewigLeibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Seeland, Germany.
Dominique VequaudSECOBRA Recherches, Maule, France.ORCID 0000-0001-7877-6587
Cynthia VossCarlsberg Research Laboratory, Copenhagen, Denmark.
Penghao WangWestern Crop Genetics Alliance, Food Futures Institute/School of Agriculture, Murdoch University, Murdoch, Western Australia, Australia.ORCID 0000-0002-3751-3921
Robbie WaughThe James Hutton Institute, Dundee, UK.ORCID 0000-0003-1045-3065
Sharon WestcottWestern Crop Genetics Alliance, Food Futures Institute/School of Agriculture, Murdoch University, Murdoch, Western Australia, Australia.
Magnus Wohlfahrt RasmussenCarlsberg Research Laboratory, Copenhagen, Denmark.ORCID 0000-0001-6720-8832
Runxuan ZhangThe James Hutton Institute, Dundee, UK.ORCID 0000-0001-7558-765X
Xiao-Qi ZhangWestern Crop Genetics Alliance, Food Futures Institute/School of Agriculture, Murdoch University, Murdoch, Western Australia, Australia.
Thomas WickerDepartment of Plant and Microbial Biology, University of Zurich, Zurich, Switzerland. wicker@botinst.uzh.ch.ORCID 0000-0002-6777-7135
Christoph DockterCarlsberg Research Laboratory, Copenhagen, Denmark. christoph.dockter@carlsberg.com.ORCID 0000-0001-5923-3667
Martin MascherLeibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Seeland, Germany. mascher@ipk-gatersleben.de.ORCID 0000-0001-6373-6013
Nils SteinLeibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Seeland, Germany. stein@ipk-gatersleben.de.ORCID 0000-0003-3011-8731

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Pangenomes are collections of annotated genome sequences of multiple individuals of a species

Indexed as

Disease ResistanceDNA Copy Number VariationsDomesticationGenome, PlantHordeumAllelesCrops, AgriculturalGenetic LociGenetic VariationGenomic Structural VariationGenotypePlant Diseases

Identifiers

PMID39537924
PMCPMC11655362

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.