Evidence map›Paper›PMID 39537860›Full record

ArticleScientific reports2024

Prognostic and immune correlation of IDO1 promoter methylation in breast cancer.

Shirong Ding, Ruozhu Yang, Jiahao Meng, Xinyu Guan, Yue Hong, Jiachi Xu, Limeng Qu, Jingfen Ji, Wenjun Yi, Qiongyan Zou and 1 more

Abstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

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4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

11 authors.

Shirong Ding *Department of Oncology, the Second Xiangya Hospital of Central South University, Changsha, China.
Ruozhu Yang *Department of General Surgery, the Second Xiangya Hospital of Central South University, 139 Middle Renmin Road, Changsha, 410011, China.
Jiahao MengDepartment of General Surgery, the Second Xiangya Hospital of Central South University, 139 Middle Renmin Road, Changsha, 410011, China.
Xinyu GuanDepartment of General Surgery, the Second Xiangya Hospital of Central South University, 139 Middle Renmin Road, Changsha, 410011, China.
Yue HongDepartment of General Surgery, the Second Xiangya Hospital of Central South University, 139 Middle Renmin Road, Changsha, 410011, China.
Jiachi XuDepartment of General Surgery, the Second Xiangya Hospital of Central South University, 139 Middle Renmin Road, Changsha, 410011, China.
Limeng QuDepartment of General Surgery, the Second Xiangya Hospital of Central South University, 139 Middle Renmin Road, Changsha, 410011, China.
Jingfen JiDepartment of General Surgery, the Second Xiangya Hospital of Central South University, 139 Middle Renmin Road, Changsha, 410011, China.
Wenjun YiDepartment of General Surgery, the Second Xiangya Hospital of Central South University, 139 Middle Renmin Road, Changsha, 410011, China.
Qiongyan ZouDepartment of General Surgery, the Second Xiangya Hospital of Central South University, 139 Middle Renmin Road, Changsha, 410011, China. zqy4311@csu.edu.cn.
Qian LongDepartment of General Surgery, the Second Xiangya Hospital of Central South University, 139 Middle Renmin Road, Changsha, 410011, China. dr_longqian@csu.edu.cn.

Funding

the China Postdoctoral Science Foundation 2023M733955the China Postdoctoral Science Foundation 2023M743946the Innovation Platform and Talent Plan of Hunan Province 2023SK4019the National Natural Science Foundation of China 82303526the National Natural Science Foundation of China 82403073the Natural Science Foundation of Changsha City kq2208309the Natural Science Foundation of the Hunan Province of China 2023JJ40842the Natural Science Foundation of the Hunan Province of China 2024JJ6590the Scientific Research Launch Project for new employees of the Second Xiangya Hospital of Central South University QH20230256the Scientific Research Launch Project for new employees of the Second Xiangya Hospital of Central South University QH20230268
6 · The paper itself

Abstract

Indoleamine 2,3-dioxygenase 1 (IDO1) plays an important role in the initiation and progression of breast cancer. DNA promoter methylation status has the potential to be used as a biomarker for predicting the response to immunotherapy. This study aimed to investigate the biological and clinical significance of IDO1 promoter methylation in breast cancer. We analyzed IDO1 promoter methylation and its relationship with survival, patient prognosis, immune cell infiltration, immune-related pathways, and the expression of key immunomodulators via bioinformatics methods in The Cancer Genome Atlas (TCGA) breast cancer cohort (779 samples). Furthermore, the IDO1 promoter methylation status and expression of the IDO1 gene in the basal subtype of breast cancer were investigated in vitro via a methylation-specific PCR (MSP) assay and quantitative polymerase chain reaction (qPCR). The IDO1 promoter was significantly hypomethylated in the basal subtype of breast cancer tissues compared with normal adjacent tissues, and this effect was correlated with high expression of IDO1, resulting in abundant immune cell infiltration, activation of immune-related pathways, and upregulation of key immunomodulators. The influence of IDO1 promoter hypomethylation on the prognosis of patients with breast cancer was also investigated. The promoter hypomethylation of IDO1 in the basal subtype of breast cancer and its correlation with high expression of IDO1 were also investigated in vitro. Our results showed that IDO1 promoter methylation is vital for regulating its expression, which leads to the development of a tumor microenvironment in breast cancer. IDO1 promoter methylation and expression are associated with prognosis, immune cell infiltration, immune-related pathways, and immunomodulator expression in breast cancer. Our findings provide evidence for the validation of IDO1 promoter methylation as a promising biomarker to predict responses to immune checkpoint inhibitors in patients with breast cancer.

Indexed as

Biomarkers, TumorBreast NeoplasmsDNA MethylationGene Expression Regulation, NeoplasticIndoleamine-Pyrrole 2,3,-DioxygenasePromoter Regions, GeneticCell Line, TumorFemaleHumansMiddle AgedPrognosisBiomarkers, TumorIDO1 protein, humanIndoleamine-Pyrrole 2,3,-DioxygenaseBiomarkerBreast cancerDNA methylationEpigeneticsIDO1Tumor immune microenvironment

Identifiers

PMID39537860
PMCPMC11561124

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.