Evidence map›Paper›PMID 39535803›Full record

ArticleThe Journal of infectious diseases2025

Epidemiologic and Genomic Characterization of an Outbreak of Rift Valley Fever Among Humans and Dairy Cattle in Northern Tanzania.

Deng B Madut, Matthew P Rubach, Kathryn J Allan, Kate M Thomas, William A de Glanville, Jo E B Halliday, Cristina Costales, Manuela Carugati, Robert J Rolfe, John P Bonnewell and 30 more

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Article in The Journal of infectious diseases, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

40 authors.

Deng B MadutDivision of Infectious Diseases and International Health, Department of Medicine, Duke University, Durham, North Carolina, USA.ORCID 0000-0003-4023-3928
Matthew P RubachDivision of Infectious Diseases and International Health, Department of Medicine, Duke University, Durham, North Carolina, USA.
Kathryn J AllanInstitute of Biodiversity, Animal Health and Comparative Medicine, University of Glasgow, Glasgow, United Kingdom.
Kate M ThomasCentre for International Health, University of Otago, Dunedin, New Zealand.ORCID 0000-0002-1589-8314
William A de GlanvilleInstitute of Biodiversity, Animal Health and Comparative Medicine, University of Glasgow, Glasgow, United Kingdom.
Jo E B HallidayInstitute of Biodiversity, Animal Health and Comparative Medicine, University of Glasgow, Glasgow, United Kingdom.
Cristina CostalesDivision of Infectious Diseases and International Health, Department of Medicine, Duke University, Durham, North Carolina, USA.
Manuela CarugatiDivision of Infectious Diseases and International Health, Department of Medicine, Duke University, Durham, North Carolina, USA.ORCID 0000-0002-3187-5905
Robert J RolfeDivision of Infectious Diseases and International Health, Department of Medicine, Duke University, Durham, North Carolina, USA.ORCID 0000-0001-9181-4023
John P BonnewellDivision of Infectious Diseases and International Health, Department of Medicine, Duke University, Durham, North Carolina, USA.
Michael J MazeDepartment of Medicine, University of Otago, Christchurch, New Zealand.ORCID 0000-0001-8909-1508
Alex R MremiKilimanjaro Christian Medical Centre, Moshi, Tanzania.ORCID 0000-0001-7226-0168
Patrick T AmsiKilimanjaro Christian Medical Centre, Moshi, Tanzania.
Nathaniel H KalengoKilimanjaro Christian Medical Centre, Moshi, Tanzania.
Furaha LyamuyaKilimanjaro Christian Medical Centre, Moshi, Tanzania.ORCID 0000-0002-2319-8246
Grace D KinaboKilimanjaro Christian Medical Centre, Moshi, Tanzania.
Ronald MbwasiKilimanjaro Christian Medical Centre, Moshi, Tanzania.ORCID 0000-0002-2365-5072
Kajiru G KilonzoKilimanjaro Christian Medical University College, Moshi, Tanzania.
Venance P MaroKilimanjaro Christian Medical University College, Moshi, Tanzania.
Blandina T MmbagaKilimanjaro Christian Medical University College, Moshi, Tanzania.
Bingileki LwezaulaMawenzi Regional Referral Hospital, Moshi, Tanzania.
Calvin MoshaMawenzi Regional Referral Hospital, Moshi, Tanzania.
Annette MaranduMawenzi Regional Referral Hospital, Moshi, Tanzania.
Tito J KibonaNelson Mandela African Institution of Science and Technology, Arusha, Tanzania.
Feng ZhuProgramme in Emerging Infectious Diseases, Duke-National University of Singapore Medical School, Singapore, Singapore.
Tanu ChawlaProgramme in Emerging Infectious Diseases, Duke-National University of Singapore Medical School, Singapore, Singapore.
Wan Ni ChiaProgramme in Emerging Infectious Diseases, Duke-National University of Singapore Medical School, Singapore, Singapore.ORCID 0000-0001-7287-694X
Danielle E AndersonProgramme in Emerging Infectious Diseases, Duke-National University of Singapore Medical School, Singapore, Singapore.ORCID 0000-0003-4791-5024
Lin-Fa WangProgramme in Emerging Infectious Diseases, Duke-National University of Singapore Medical School, Singapore, Singapore.ORCID 0000-0003-2752-0535
Jie LiuSchool of Public Health, Qingdao University, Qingdao, China.ORCID 0000-0003-2658-5249
Eric R HouptDivision of Infectious Diseases and International Health, Department of Medicine, University of Virginia, Charlottesville, Virginia, USA.
Roosecelis B MartinesInfectious Diseases Pathology Branch, Centers for Disease Control and Prevention, Atlanta, Georgia, USA.
Sherif R ZakiInfectious Diseases Pathology Branch, Centers for Disease Control and Prevention, Atlanta, Georgia, USA.
Austin LeachViral Special Pathogens Branch, Centers for Disease Control and Prevention, Atlanta, Georgia, USA.
Aridth GibbonsViral Special Pathogens Branch, Centers for Disease Control and Prevention, Atlanta, Georgia, USA.
Cheng-Feng ChiangViral Special Pathogens Branch, Centers for Disease Control and Prevention, Atlanta, Georgia, USA.
Ketan PatelViral Special Pathogens Branch, Centers for Disease Control and Prevention, Atlanta, Georgia, USA.
John D KlenaViral Special Pathogens Branch, Centers for Disease Control and Prevention, Atlanta, Georgia, USA.ORCID 0000-0001-9933-6193
Sarah CleavelandInstitute of Biodiversity, Animal Health and Comparative Medicine, University of Glasgow, Glasgow, United Kingdom.ORCID 0000-0002-0456-0959
John A CrumpCentre for International Health, University of Otago, Dunedin, New Zealand.ORCID 0000-0002-4529-102X

Funding

Ruth L. Kirschstein National Research Service Award (NRSA)- T32T32AI007392 · NIAID · DUKE UNIVERSITY · PI Amy Lynn Corneli, Guido Ferrari · 1990 to 2026
$9.8M
Vanderbilt-Emory-Cornell-Duke Global Health Fellowship Consortium-Expanding Diversity for Global Equity (EDGE)D43TW009337 · FIC · VANDERBILT UNIVERSITY MEDICAL CENTER · PI ALIYU, MUKTAR HASSAN, HEIMBURGER, DOUGLAS CORBETT · 2017 to 2021
$6.3M
International Clinical Trials UnitU01AI062563 · NIAID · DUKE UNIVERSITY · PI BARTLETT, JOHN A · 2004 to 2007
$4.0M
Investigating Febrile Deaths in Tanzania (INDITe)R01AI121378 · NIAID · DUKE UNIVERSITY · PI RUBACH, MATTHEW P · 2016 to 2020
$2.7M
The Impact and Society Ecology of Bacterial Zoonoses in Northern Tanzania: UnderR01TW009237 · FIC · DUKE UNIVERSITY · PI CRUMP, JOHN ANDREW · 2011 to 2014
$1.7M
Viral Zoonoses and Severe Febrile Illness in Northern TanzaniaK23AI116869 · NIAID · DUKE UNIVERSITY · PI RUBACH, MATTHEW P · 2016 to 2020
$896k
Transmission dynamics and epidemiology of Rift Valley fever virus in northern TanzaniaK08AI182480 · NIAID · DUKE UNIVERSITY · PI Deng Buok Madut · 2024 to 2026
$483k
Biotechnology and Biological Sciences Research Council BB/R020280/1FIC NIH HHS D43 TW009337FIC NIH HHS R01 TW009237Intramural CDC HHS CC999999NIAID NIH HHS K08 AI182480NIAID NIH HHS K23 AI116869NIAID NIH HHS R01 AI121378NIAID NIH HHS T32 AI007392NIAID NIH HHS U01 AI062563NIH Fogarty International Center D43TW009337University of Edinburgh R83537US National Institute of Health 5T32AI007392US National Institute of Health D43TW009337US National Institute of Health R01TW009237
6 · The paper itself

Abstract

backgroundA periurban outbreak of Rift Valley fever virus (RVFV) among dairy cattle from May through August 2018 in northern Tanzania was detected through testing samples from prospective livestock abortion surveillance. We sought to identify concurrent human infections, their phylogeny, and epidemiologic characteristics in a cohort of febrile patients enrolled from 2016 to 2019 at hospitals serving the epizootic area.

methodsFrom September 2016 through May 2019, we conducted a prospective cohort study that enrolled febrile patients hospitalized at 2 hospitals in Moshi, Tanzania. Archived serum, plasma, or whole blood samples were retrospectively tested for RVFV by PCR. Human samples positive for RVFV were sequenced and compared to RVFV sequences obtained from cattle through a prospective livestock abortion study. Phylogenetic analysis was performed on complete RVFV genomes.

resultsAmong 656 human participants, we detected RVFV RNA in 4 (0.6%), including 1 death with hepatic necrosis and other end-organ damage at autopsy. Humans infected with RVFV were enrolled from June through August 2018, and all resided in or near urban areas. Phylogenetic analysis of human and cattle RVFV sequences demonstrated that most clustered to lineage B, a lineage previously described in East Africa. A lineage E strain clustering with lineages in Angola was also identified in cattle.

conclusionsWe provide evidence that an apparently small RVFV outbreak among dairy cattle in northern Tanzania was associated with concurrent severe and fatal infections among humans. Our findings highlight the unidentified scale and diversity of interepizootic RVFV transmission, including near and within an urban area.

Indexed as

Cattle DiseasesDisease OutbreaksRift Valley FeverRift Valley fever virusAdolescentAdultAgedAnimalsCattleChildFemaleGenome, ViralHumansMaleMiddle AgedPhylogenyRNA, ViralAfricaCrimean-Congo hemorrhagic feverRift Valley feverTanzaniazoonoses

Identifiers

PMID39535803
PMCPMC12069657

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.