Evidence map›Paper›PMID 39535643›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2025

Imaging and Quantifying Ribosomal Frameshifting Dynamics with Single-RNA Precision in Live Cells.

Kenneth R Lyon, Tatsuya Morisaki, Timothy J Stasevich

Abstract read
In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Kenneth R LyonDepartment of Biochemistry and Molecular Biology, Colorado State University, Fort Collins, CO, USA.
Tatsuya MorisakiDepartment of Biochemistry and Molecular Biology, Colorado State University, Fort Collins, CO, USA.
Timothy J StasevichDepartment of Biochemistry and Molecular Biology, Colorado State University, Fort Collins, CO, USA. tim.stasevich@colostate.edu.

Funding

Quantifying the coordinated dynamics of single-gene transcription and translation in living cellsR35GM119728 · NIGMS · COLORADO STATE UNIVERSITY · PI Timothy Stasevich · 2016 to 2026
$4.2M
NIGMS NIH HHS R35 GM119728
6 · The paper itself

Abstract

Recent advances in fluorescence microscopy have now made it possible to measure the translation dynamics of individual RNA in living cells and in multiple colors. Here we describe a protocol that exploits these recent advances to simultaneously image the translation of two open reading frames encoded on a single reporter RNA yet frameshifted with respect to each other. This enables precise measurements of frameshifting dynamics and efficiency from specific frameshift stimulatory sequences, all with single-RNA precision.

Indexed as

Frameshifting, RibosomalMicroscopy, FluorescenceGenes, ReporterHumansOpen Reading FramesProtein BiosynthesisRibosomesRNARNA, MessengerRNARNA, MessengerFrameshiftingGene regulationSingle-molecule imagingTranslationViruses

Identifiers

PMID39535643
PMCPMC11633442

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.