Evidence map›Paper›PMID 39535360›Full record

ArticleMovement disorders clinical practice2025

The Genomic Landscape of Wilson Disease in a Pan India Disease Cohort and Population-Scale Data.

Mukesh Kumar, Srishti Sharma, Sanjay Pandey, Geetha Mammayil, Aslam Pala Kuzhiyil, Srijaya Sreesh, Riyaz Arakkal, Divya M Radhakrishnan, Roopa Rajan, Deepak Amalnath and 30 more

Abstract readMulticenter Study
In one paragraph

Article in Movement disorders clinical practice, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

40 authors.

Mukesh KumarCSIR Institute of Genomics and Integrative Biology, New Delhi, India.ORCID 0000-0002-1705-8853
Srishti SharmaCSIR Institute of Genomics and Integrative Biology, New Delhi, India.ORCID 0000-0003-3568-9648
Sanjay PandeyDepartment of Neurology and Stroke Medicine, Amrita Hospital, Faridabad, India.ORCID 0000-0003-1771-9137
Geetha MammayilAster DM Healthcare Limited, Cochin, India.
Aslam Pala KuzhiyilDepartment of Pediatrics, Govt Medical College, Kozhikode, India.
Srijaya SreeshDepartment of Medical Gastroenterology and Hepatology, Government Medical College, Trivandrum, India.
Riyaz ArakkalKannur Medical College, Anjarakandy Integrated Campus, Kannur, India.
Divya M RadhakrishnanDepartment of Neurology, AIIMS, New Delhi, India.ORCID 0000-0002-0641-7398
Roopa RajanDepartment of Neurology, AIIMS, New Delhi, India.
Deepak AmalnathJawaharlal Institute of Postgraduate Medical Education and Research (JIPMER), Puducherry, India.
Reena GulatiJawaharlal Institute of Postgraduate Medical Education and Research (JIPMER), Puducherry, India.
Naresh TayadeLife Care Hospital, Amravati, India.
Shine SadasivanDepartment of Hepatology and Gastroenterology, Amrita Institute of Medical Sciences and Research (AIMS), Kochi, India.
Arun ValsanDepartment of Hepatology and Gastroenterology, Amrita Institute of Medical Sciences and Research (AIMS), Kochi, India.
Jagadeesh MenonDepartment of Pediatric Hepatology and Gastroenterology, Dr Rela Institute and Medical Centre, Chennai, India.
Mahesh KamateChild Neurology, Belgaum Medical College, Belgaum, India.
Sandeep Kumar MathurDepartment of Endocrinology, SMS Medical College and Hospital, Jaipur, India.
Radha MahadevanDepartment of Neurology, Tirunelveli Medical College, Tirunelveli, India.
Bhavna DhingraDepartment of Paediatrics, All India Institute of Medical Sciences (AIIMS), Bhopal, India.
Rajneesh RajanKIMS Trust Hospital, Kozhikode, India.
Kuldeep SinghDepartment of Pediatrics, AIIMS Jodhpur, Jodhpur, India.
ShalimarDepartment of Gastroenterology and Human Nutrition, All India Institute of Medical Sciences, New Delhi, India.
Suja K GeevargheseHoly Family Hospital, Muthalakkodam, India.
Vikram S KumarSubbaiah Institute of Medical Sciences, Shivamogga, India.
John MenacheryDepartment Gastroenterology, Rajagiri Hospital, Aluva, India.
Aminu AliyarDepartment of Neurology, AIIMS, New Delhi, India.
Rahul C BhoyarCSIR Institute of Genomics and Integrative Biology, New Delhi, India.
Bani JollyCSIR Institute of Genomics and Integrative Biology, New Delhi, India.
Abhinav JainCSIR Institute of Genomics and Integrative Biology, New Delhi, India.
Arvinden Vittal RanganCSIR Institute of Genomics and Integrative Biology, New Delhi, India.
Trisha MoitraCSIR Institute of Genomics and Integrative Biology, New Delhi, India.
Aditi MhaskeCSIR Institute of Genomics and Integrative Biology, New Delhi, India.
Vishu GuptaCSIR Institute of Genomics and Integrative Biology, New Delhi, India.
Vigneshwar SenthivelCSIR Institute of Genomics and Integrative Biology, New Delhi, India.
Anushree MishraCSIR Institute of Genomics and Integrative Biology, New Delhi, India.
Arti SainiDepartment of Neurology, AIIMS, New Delhi, India.ORCID 0000-0001-5223-9206
Utkarsh GaharwarCSIR Institute of Genomics and Integrative Biology, New Delhi, India.
Sridhar SivasubbuCSIR Institute of Genomics and Integrative Biology, New Delhi, India.
Vinod ScariaCSIR Institute of Genomics and Integrative Biology, New Delhi, India.
Binukumar B KCSIR Institute of Genomics and Integrative Biology, New Delhi, India.

Funding

Council of Scientific and Industrial Research MLP2001Council of Scientific and Industrial Research MLP2008Council of Scientific and Industrial Research OLP2301
6 · The paper itself

Abstract

backgroundWilson's disease (WD) results from pathogenic ATP7B gene variations, causing copper accumulation mainly in the liver, brain, and kidneys.

objectivesIn India, despite studies on ATP7B variants, WD often goes undiagnosed, with the prevalence, carrier rate, and mutation spectrum remaining unknown.

methodsA multicenter study examined genetic variations in WD among individuals of Indian origin via whole exome sequencing. The study used the InDelible structural variants calling pipeline and conducted molecular dynamic simulations on variants of uncertain significance (VUS) in ATP7B AlphaFold protein structures. Additionally, a high-throughput gene screening panel for WD was developed.

resultsThis study examined 128 clinically diagnosed cases of WD, revealing 74 genetically confirmed cases, 22 with ATP7B variants, and 32 without. Twenty-two novel ATP7B gene variants were identified, including a 322 bp deletion classified as a structural variant. Molecular dynamics simulations highlighted the potential deleterious effects of 11 ATP7B VUS. Gene burden analysis suggested associations with ANO8, LGR4, and CDC7. ATP7B gene hotspots for pathogenic variants were identified. Prevalence and carrier rates were determined as one in 18,678 and one in 67, respectively. A multiplex sequencing panel showed promise for accurate WD diagnosis.

conclusionsThis study offers crucial insights into WD's genetic variations and prevalence in India, addressing its underdiagnosis. It highlights the novel genetic variants in the ATP7B gene, the involvement of other genes, a scalable, cost-effective multiplex sequencing panel for WD diagnosis and management and promising advancements in WD care.

Indexed as

Copper-Transporting ATPasesHepatolenticular DegenerationAdolescentAdultChildCohort StudiesFemaleHumansIndiaMaleMutationYoung AdultATP7B protein, humanCopper-Transporting ATPasesATP7Bgene burden analysismolecular dynamic simulationstructural variantsvariantwhole exome sequencing

Identifiers

PMID39535360
PMCPMC11802660

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