Evidence map›Paper›PMID 39534657›Full record

ArticleF1000Research2024

Spatiotemporal structure and composition of the microbial communities in hypersaline Lake Magadi, Kenya.

Alex Kipnyargis, Eucharia Kenya, Fathiya Khamis, Romano Mwirichia

Abstract read
In one paragraph

Article in F1000Research, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Current research in microbial sciences · 2025
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Alex KipnyargisDepartment of Biological Sciences, University of Embu, Embu, Kenya.ORCID 0000-0002-1840-2054
Eucharia KenyaDepartment of Biological Sciences, University of Embu, Embu, Kenya.
Fathiya KhamisArthropod Pathology, International Centre of Insect Physiology and Ecology, Nairobi, Nairobi County, Kenya.
Romano MwirichiaDepartment of Biological Sciences, University of Embu, Embu, Kenya.ORCID 0000-0002-4198-5593

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Soda lakes are habitats characterized by haloalkaline conditions also known to host unique microbial communities. The water chemistry changes with seasons due to evaporative concentration or floods from the surrounding grounds. However, it is not yet clear if the change in physiochemical changes influences the spatiotemporal diversity and structure of microbial communities in these ecosystems. Methods: Using 16S rRNA gene amplicon sequencing, we investigated the diversity and structure of microbial communities in water and brine samples taken from Lake Magadi between June and September 2018. Additionally, physicochemical parameters were also analyzed for every sampling site. Additionally, physicochemical parameters were also analyzed for every sampling site. Results: The abundant bacterial phyla were Proteobacteria, Cyanobacteria, Bacteroidetes, Actinobacteria, Firmicutes, Verrumicrobia, Deinococcus-Thermus, Spirochaetes, and Chloroflexi. The Archaeal diversity was represented by phyla Euryachaeota, Crenarchaeota, Euryarchaeota, and Thaumarchaeota. The dominant bacterial species were: Conclusions: We provide insights into the relationships between microbial structure and geochemistry across various sampling sites in Lake Magadi.

Indexed as

BacteriaLakesMicrobiotaRNA, Ribosomal, 16SSalinityArchaeaBiodiversityKenyaSeasonsSpatio-Temporal AnalysisWater MicrobiologyRNA, Ribosomal, 16Sarchaeabacteriaphysicochemical parametersSoda lakespatiotemporalα-diversityβ-diversity

Identifiers

PMID39534657
PMCPMC11555362

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.