Evidence map›Paper›PMID 39533301›Full record

ArticleParasites & vectors2024

End-point diagnostics of Giardia duodenalis assemblages A and B by combining RPA with CRISPR/Cas12a from human fecal samples.

Yilin Wang, Fuchang Yu, Yin Fu, Qian Zhang, Jinfeng Zhao, Ziyang Qin, Ke Shi, Yayun Wu, Junqiang Li, Xiaoying Li and 1 more

Abstract read
In one paragraph

Article in Parasites & vectors, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Yilin WangCollege of Veterinary Medicine, Henan Agricultural University, Zhengzhou, Henan, 450000, People's Republic of China.
Fuchang YuCollege of Veterinary Medicine, Henan Agricultural University, Zhengzhou, Henan, 450000, People's Republic of China.
Yin FuCollege of Veterinary Medicine, Henan Agricultural University, Zhengzhou, Henan, 450000, People's Republic of China.
Qian ZhangYebio Bioengineering Co., Ltd of Qingdao, Qingdao, 266108, Shandong, People's Republic of China.
Jinfeng ZhaoCollege of Veterinary Medicine, Henan Agricultural University, Zhengzhou, Henan, 450000, People's Republic of China.
Ziyang QinCollege of Veterinary Medicine, Henan Agricultural University, Zhengzhou, Henan, 450000, People's Republic of China.
Ke ShiSchool of Medicine, Xinxiang University, Jinsui Road 191, Xinxiang, 453003, People's Republic of China.
Yayun WuCollege of Veterinary Medicine, Henan Agricultural University, Zhengzhou, Henan, 450000, People's Republic of China.
Junqiang LiCollege of Veterinary Medicine, Henan Agricultural University, Zhengzhou, Henan, 450000, People's Republic of China.
Xiaoying LiCollege of Veterinary Medicine, Henan Agricultural University, Zhengzhou, Henan, 450000, People's Republic of China.
Longxian ZhangCollege of Veterinary Medicine, Henan Agricultural University, Zhengzhou, Henan, 450000, People's Republic of China. zhanglx8999@henau.edu.cn.

Funding

National Key Research and Development Program of China 2023YFD1801200the Key Research and Development Project of Henan Province 231111111500the Key Scientific Research Foundation of the Higher Education Institutions of Henan Province 22A310019
6 · The paper itself

Abstract

backgroundGiardia duodenalis is a common enteric protozoan parasite that is categorized into eight assemblages (A-H). In particular, assemblages A and B are zoonotic, capable of infecting both humans and animals worldwide, resulting in significant economic losses and public health challenges in epidemic regions. Thus, the development of rapid, accurate and non-laboratory-based diagnostic methods for infected animals is crucial for the effective prevention and control of giardiasis. Recent advancements in clustered, regularly interspaced, short palindromic repeats (CRISPR) and CRISPR-associated (Cas) protein (Cas12a) systems allow promising avenues for nucleic acid detection, characterized by their high flexibility, sensitivity and specificity.

methodsCombined recombinase polymerase amplification and CRISPR/Cas12a systems were combined and used as end-point diagnostic methods (termed REPORT) to detect G. duodenalis assemblage A and B. The diagnostic results can be observed by fluorescence readouts with the naked eye under blue light or colorimetric signals using a lateral flow strip (LFS).

resultsThe limit of detection (LOD) of the REPORT‑based G. duodenalis assemblage A detection was 2.04 CFU/ml and 10 trophozoites per gram (TPG), and the LOD of assemblage B was 1.1 CFU/ml and 10 cysts per gram (CPG). The REPORT‑based G. duodenalis assemblage A and assemblage B detection methods have strong specificity and no cross-reactivity with other assemblages of G. duodenalis or common enteric parasitic protozoa and have excellent performance in clinical sample detection.

conclusionsThis study presents a novel strategy for the direct identification of G. duodenalis assemblages A and B, requiring neither highly trained personnel nor costly specialized equipment.

Indexed as

CRISPR-Cas SystemsFecesGiardia lambliaGiardiasisSensitivity and SpecificityHumansLimit of DetectionNucleic Acid Amplification TechniquesCRISPR/Cas12aGiardia duodenalisOn-site detectionRecombinase polymerase amplificationVisualized detection

Identifiers

PMID39533301
PMCPMC11558988

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.