Evidence map›Paper›PMID 39533198›Full record

ArticleBMC genomics2024

Transcriptome and genome-wide analysis of the mango glycosyltransferase family involved in mangiferin biosynthesis.

Yibo Bai, Xinran Huang, Rundong Yao, Muhammad Mubashar Zafar, Waqas Shafqat Chattha, Fei Qiao, Hanqing Cong

Abstract read
In one paragraph

Article in BMC genomics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

7 authors.

Yibo Bai *National Key Laboratory for Tropical Crop Breeding, Tropical Crops Genetic Resources Institute, Chinese Academy of Tropical Agricultural Sciences, Sanya, 572024, China.
Xinran Huang *Key Laboratory of Crop Gene Resources and Germplasm Enhancement in Southern China, Ministry of Agriculture and Rural Affairs, Tropical Crops Genetic Resources Institute, Chinese Academy of Tropical Agricultural Sciences, Haikou, 571101, China.
Rundong YaoKey Laboratory of Crop Gene Resources and Germplasm Enhancement in Southern China, Ministry of Agriculture and Rural Affairs, Tropical Crops Genetic Resources Institute, Chinese Academy of Tropical Agricultural Sciences, Haikou, 571101, China.
Muhammad Mubashar ZafarKey Laboratory of Crop Gene Resources and Germplasm Enhancement in Southern China, Ministry of Agriculture and Rural Affairs, Tropical Crops Genetic Resources Institute, Chinese Academy of Tropical Agricultural Sciences, Haikou, 571101, China. m.mubasharzafar@gmail.com.
Waqas Shafqat ChatthaDepartment of Plant Breeding and Genetics, University of Agriculture, Faisalabad, Punjab, 38000, Pakistan.
Fei QiaoNational Key Laboratory for Tropical Crop Breeding, Tropical Crops Genetic Resources Institute, Chinese Academy of Tropical Agricultural Sciences, Sanya, 572024, China. fei.qiao@catas.cn.
Hanqing CongNational Key Laboratory for Tropical Crop Breeding, Tropical Crops Genetic Resources Institute, Chinese Academy of Tropical Agricultural Sciences, Sanya, 572024, China. hanqing.cong@catas.cn.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mangiferin, a C-glucosyl xanthone, is a biologically active glycoside naturally synthesized in mango. Glycosyltransferase can catalyze the biosynthesis of mangiferin. In this study, we identified 221 members of the UGT glycosyltransferase family in mango. The 221 MiUGT genes were grouped into 13 subfamilies through phylogenetic tree analysis with Arabidopsis, Chinese bayberry, and mango. All UGT family members in mango were unevenly distributed on 17 chromosomes and found that tandem duplication dominated the expansion of UGT family members in mango. Purification selection primarily influenced the evolution of the mango UGT family members. In addition, cis-element analysis of the mango UGT gene family revealed the presence of MYB binding sites, which are involved in flavonoid biosynthesis; which further supports the role of UGT family members in the synthesis of flavonoids. To verify these results, we analyzed the expression of UGT family members in mango leaves, stems, and different developmental stages of fruit peel. The RNA-seq and qRT-PCR results showed significant differences in the expression patterns of MiUGT genes in various tissues and developmental stages of mango. We identified MiUGT gene-specific expression at different stages of fruit development. These results lay a theoretical foundation for research on the relationship between members of the mango UGT family and the synthesis of flavonoids, mangiferin.

Indexed as

GlycosyltransferasesMangiferaPhylogenyXanthonesFruitGene Expression ProfilingGene Expression Regulation, PlantGenome, PlantMultigene FamilyPlant ProteinsTranscriptomeGlycosyltransferasesmangiferinPlant ProteinsXanthonesFlavonoidsGene-specific expressionMiUGTTissues

Identifiers

PMID39533198
PMCPMC11555977

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.