Evidence map›Paper›PMID 39532958›Full record

ArticleScientific reports2024

Genetic remodeling of soil diazotrophs enables partial replacement of synthetic nitrogen fertilizer with biological nitrogen fixation in maize.

Rafael Martinez-Feria, Maegen B Simmonds, Bilge Ozaydin, Stacey Lewis, Allison Schwartz, Alex Pluchino, Megan McKellar, Shayin S Gottlieb, Tasha Kayatsky, Richelle Vital and 20 more

Abstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Review
  2. Review
  3. Review
  4. Nitrogenase regulation inbioRxiv : the preprint server for biology · 2026
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Review
  11. Article
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  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

30 authors.

Rafael Martinez-Feria *Pivot Bio, Inc., 2910 Seventh St, Berkeley, CA, 94710, USA. rmartinez-feria@pivotbio.com.
Maegen B Simmonds *Pivot Bio, Inc., 2910 Seventh St, Berkeley, CA, 94710, USA.
Bilge OzaydinPivot Bio, Inc., 2910 Seventh St, Berkeley, CA, 94710, USA.
Stacey LewisPivot Bio, Inc., 2910 Seventh St, Berkeley, CA, 94710, USA.
Allison SchwartzPivot Bio, Inc., 2910 Seventh St, Berkeley, CA, 94710, USA.
Alex PluchinoPivot Bio, Inc., 2910 Seventh St, Berkeley, CA, 94710, USA.
Megan McKellarPivot Bio, Inc., 2910 Seventh St, Berkeley, CA, 94710, USA.
Shayin S GottliebPivot Bio, Inc., 2910 Seventh St, Berkeley, CA, 94710, USA.
Tasha KayatskyPivot Bio, Inc., 2910 Seventh St, Berkeley, CA, 94710, USA.
Richelle VitalPivot Bio, Inc., 2910 Seventh St, Berkeley, CA, 94710, USA.
Sharon E MehlmanPivot Bio, Inc., 2910 Seventh St, Berkeley, CA, 94710, USA.
Zoe CaronPivot Bio, Inc., 2910 Seventh St, Berkeley, CA, 94710, USA.
Nicholas R ColaianniPivot Bio, Inc., 2910 Seventh St, Berkeley, CA, 94710, USA.
Jean-Michel AnéDepartment of Plant and Agroecosystem Sciences, University of Wisconsin-Madison, 1575 Linden Drive, Madison, WI, 53706, USA.
Junko MaedaDepartment of Plant and Agroecosystem Sciences, University of Wisconsin-Madison, 1575 Linden Drive, Madison, WI, 53706, USA.
Valentina InfanteDepartment of Plant and Agroecosystem Sciences, University of Wisconsin-Madison, 1575 Linden Drive, Madison, WI, 53706, USA.
Bjorn H KarlssonDepartment of Plant and Agroecosystem Sciences, University of Wisconsin-Madison, 1575 Linden Drive, Madison, WI, 53706, USA.
Caitlin McLimansDepartment of Plant and Agroecosystem Sciences, University of Wisconsin-Madison, 1575 Linden Drive, Madison, WI, 53706, USA.
Tony VynDepartment of Agronomy, Purdue University, 915 Mitch Daniels Blvd, West Lafayette, IN, 479074, USA.
Brendan HansonDepartment of Agronomy, Purdue University, 915 Mitch Daniels Blvd, West Lafayette, IN, 479074, USA.
Garrett VerhagenPivot Bio, Inc., 2910 Seventh St, Berkeley, CA, 94710, USA.
Clayton NevinsPivot Bio, Inc., 2910 Seventh St, Berkeley, CA, 94710, USA.
Lori ReesePivot Bio, Inc., 2910 Seventh St, Berkeley, CA, 94710, USA.
Paul OtyamaPivot Bio, Inc., 2910 Seventh St, Berkeley, CA, 94710, USA.
Alice RobinsonPivot Bio, Inc., 2910 Seventh St, Berkeley, CA, 94710, USA.
Timothy LearmonthPivot Bio, Inc., 2910 Seventh St, Berkeley, CA, 94710, USA.
Christine M F MillerPivot Bio, Inc., 2910 Seventh St, Berkeley, CA, 94710, USA.
Keira HavensPivot Bio, Inc., 2910 Seventh St, Berkeley, CA, 94710, USA.
Alvin TamsirPivot Bio, Inc., 2910 Seventh St, Berkeley, CA, 94710, USA.
Karsten TemmePivot Bio, Inc., 2910 Seventh St, Berkeley, CA, 94710, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Increasing biological nitrogen (N) fixation (BNF) in maize production could reduce the environmental impacts of N fertilizer use, but reactive N in the rhizosphere of maize limits the BNF process. Using non-transgenic methods, we developed gene-edited strains of Klebsiella variicola (Kv137-2253) and Kosakonia sacchari (Ks6-5687) bacteria optimized for root-associated BNF and ammonium excretion in N-rich conditions. The aim of this research was to elucidate the mechanism of action of these strains. We present evidence from in vitro, in planta and field experiments that confirms that our genetic remodeling strategy derepresses BNF activity in N-rich systems and increases ammonium excretion by orders of magnitude above the respective wildtype strains. BNF is demonstrated in controlled environments by the transfer of labeled

Indexed as

FertilizersNitrogenNitrogen FixationRhizosphereSoil MicrobiologyZea maysKlebsiellaPlant RootsSoilFertilizersNitrogenSoil

Identifiers

PMID39532958
PMCPMC11557888

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.