Evidence map›Paper›PMID 39532919›Full record

ArticleScientific reports2024

Enhancing genomic disorder prediction through Feynman Concordance and Interpolated Nearest Centroid techniques.

Sofia Singh, Garima Shukla, Rahul Agrawal, Chetan Dhule, Sarah Allabun, Mohammed S Alqahtani, Manal Othman, Mohamed Abbas, Ben Othman Soufiene

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Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

9 authors.

Sofia SinghDepartment of AI, ASET, Amity University, Noida, UP, India.
Garima ShuklaDepartment of CSE, Amity University, Mumbai, India.
Rahul AgrawalDepartment of Data Science, IoT, Cybersecurity (DIC), G H Raisoni College of Engineering Nagpur, Nagpur, Maharashtra, India.
Chetan DhuleDepartment of Data Science, IoT, Cybersecurity (DIC), G H Raisoni College of Engineering Nagpur, Nagpur, Maharashtra, India.
Sarah AllabunDepartment of Medical Education, College of Medicine, Princess Nourah bint Abdulrahman University, P.O.Box 84428, Riyadh, 11671, Saudi Arabia.
Mohammed S AlqahtaniRadiological Sciences Department, College of Applied Medical Sciences, King Khalid University, Abha, 61421, Saudi Arabia.
Manal OthmanDepartment of Medical Education, College of Medicine, Princess Nourah bint Abdulrahman University, P.O.Box 84428, Riyadh, 11671, Saudi Arabia.
Mohamed AbbasElectrical Engineering Department, College of Engineering, King Khalid University, Abha, 61421, Saudi Arabia.
Ben Othman SoufienePRINCE Laboratory Research, ISITcom, Hammam Sousse, University of Sousse, Sousse, Tunisia. soufiene.benothman@isim.rnu.tn.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Clinical biomedical applications of genomic technologies are extensive and provide possibilities to enhance healthcare covering the span of medical talents. Genome disorder prediction is an important issue in biomedical research. Genome disorders cause multivariate diseases such as cancer, dementia, diabetes, Leigh syndrome, etc. Existing machine and deep learning-based methods were introduced to forecast genome disorders. However, the genome prediction outcomes were not sufficient. To address this issue, propose a new method called Quadratic Feynman Polynomial Interpolated and Vector Nearest Centroid-based (QFPI-VNC) for acutely predicting the genome disorder with improved sensitivity and specificity. First, we utilized medical data about children from a public genomes dataset and applied it to Linear Quadratic and Feynman Kac Genome filtering to obtain computationally efficient filtered results. Next, the results are fed to the Concordance Correlated Polynomial Interpolation with the purpose of extracting genome wide data in an accurate manner. Finally, the features extracted are fused and fed to the Support Vector and Nearest Centroid model for genome disorder prediction. Experimental investigations of the proposed method employing the genome dataset confirm that the performance of the proposed method is prospective and in the scope of acceptance with relative to state-of-the-art methods in terms of convergence speed, recognition rate, sensitivity, and specificity. Results suggest that the QFPI-VNC method produces the best performance with a higher genome disease detection rate by 14%, accuracy by 11%, sensitivity by 14% specificity by 12%, and lesser convergence speed by 29% than compared to state-of-the-art methods.

Indexed as

GenomicsAlgorithmsComputational BiologyGenome, HumanHumansBiomedicalConcordance correlatedFeynman KacGenomicLinear QuadraticPolynomial interpolationSupport Vector

Identifiers

PMID39532919
PMCPMC11557834

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