Evidence map›Paper›PMID 39532858›Full record

ArticleNature communications2024

Reprogramming of flagellin receptor responses with surrogate ligands.

Du-Hwa Lee, Ho-Seok Lee, Min-Soo Choi, Katarzyna Parys, Kaori Honda, Yasumitsu Kondoh, Jung-Min Lee, Natalie Edelbacher, Geon Heo, Balaji Enugutti and 3 more

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Du-Hwa LeeGregor Mendel Institute (GMI), Austrian Academy of Sciences, Vienna BioCenter (VBC), Dr. Bohr-Gasse 3, Vienna, Austria. duhwa.lee@boku.ac.at.ORCID 0000-0003-4106-7730
Ho-Seok LeeGregor Mendel Institute (GMI), Austrian Academy of Sciences, Vienna BioCenter (VBC), Dr. Bohr-Gasse 3, Vienna, Austria.
Min-Soo ChoiGregor Mendel Institute (GMI), Austrian Academy of Sciences, Vienna BioCenter (VBC), Dr. Bohr-Gasse 3, Vienna, Austria.
Katarzyna ParysGregor Mendel Institute (GMI), Austrian Academy of Sciences, Vienna BioCenter (VBC), Dr. Bohr-Gasse 3, Vienna, Austria.ORCID 0000-0002-0141-0349
Kaori HondaRIKEN Center for Sustainable Resource Science, Wako, Saitama, Japan.
Yasumitsu KondohRIKEN Center for Sustainable Resource Science, Wako, Saitama, Japan.
Jung-Min LeeGregor Mendel Institute (GMI), Austrian Academy of Sciences, Vienna BioCenter (VBC), Dr. Bohr-Gasse 3, Vienna, Austria.ORCID 0000-0003-2603-4789
Natalie EdelbacherGregor Mendel Institute (GMI), Austrian Academy of Sciences, Vienna BioCenter (VBC), Dr. Bohr-Gasse 3, Vienna, Austria.
Geon HeoGregor Mendel Institute (GMI), Austrian Academy of Sciences, Vienna BioCenter (VBC), Dr. Bohr-Gasse 3, Vienna, Austria.ORCID 0000-0001-8754-5668
Balaji EnuguttiGregor Mendel Institute (GMI), Austrian Academy of Sciences, Vienna BioCenter (VBC), Dr. Bohr-Gasse 3, Vienna, Austria.
Hiroyuki OsadaRIKEN Center for Sustainable Resource Science, Wako, Saitama, Japan.ORCID 0000-0002-3606-4925
Ken ShirasuRIKEN Center for Sustainable Resource Science, Yokohama, Japan.ORCID 0000-0002-0349-3870
Youssef BelkhadirGregor Mendel Institute (GMI), Austrian Academy of Sciences, Vienna BioCenter (VBC), Dr. Bohr-Gasse 3, Vienna, Austria. ybelkhad@gmail.com.ORCID 0000-0001-7149-7139

Funding

Austrian Science Fund (Fonds zur Förderung der Wissenschaftlichen Forschung) I 3654Ministry of Education, Culture, Sports, Science and Technology (MEXT) JP20H05909Ministry of Education, Culture, Sports, Science and Technology (MEXT) JP21H04720Ministry of Education, Culture, Sports, Science and Technology (MEXT) JP22H00364National Research Foundation of Korea (NRF) NRF-2021R1A6A3A03039464Vienna Science and Technology Fund (Wiener Wissenschafts-, Forschungs- und Technologiefonds) LS17-047
6 · The paper itself

Abstract

Receptor kinase (RK) families process information from small molecules, short peptides, or glycan ligands to regulate core cellular pathways in plants. To date, whether individual plant RKs are capable of processing signals from distinct types of ligands remains largely unexplored. Addressing this requires the discovery of structurally unrelated ligands that engage the same receptor. Here, we focus on FLAGELLIN-SENSING 2 (FLS2), an RK that senses a peptide of bacterial flagellin to activate antibacterial immunity in Arabidopsis. We interrogate >20,000 potential interactions between small molecules and the sensory domain of FLS2 using a large-scale reverse chemical screen. We discover two small molecules that interact with FLS2 in atypical ways. The surrogate ligands weakly activate the receptor to drive a functional antibacterial response channeled via unusual gene expression programs. Thus, chemical probes acting as biased ligands can be exploited to discover unexpected levels of output flexibility in RKs signal transduction.

Indexed as

ArabidopsisArabidopsis ProteinsFlagellinProtein KinasesSignal TransductionGene Expression Regulation, PlantLigandsPlant ImmunityTranscription FactorsArabidopsis ProteinsFlagellinFLS2 protein, ArabidopsisLigandsProtein KinasesTranscription Factors

Identifiers

PMID39532858
PMCPMC11557590

What OpenQuestion holds

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LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.