Evidence map›Paper›PMID 39531180›Full record

ArticleJournal of epidemiology and global health2024

Limited Evidence of Spillover of Antimicrobial-Resistant Klebsiella pneumoniae from Animal/Environmental Reservoirs to Humans in Vellore, India.

Jobin John Jacob, V Aravind, Benjamin S Beresford-Jones, Y Binesh Lal, Chaitra Shankar, M Yesudoss, Fiza Abdullah, T Monisha Priya, Sanika Kulkarni, Stephen Baker and 2 more

Abstract read
In one paragraph

Article in Journal of epidemiology and global health, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Jobin John JacobDepartment of Clinical Microbiology, Christian Medical College, Vellore, Tamil Nadu, 632004, India.
V AravindDepartment of Clinical Microbiology, Christian Medical College, Vellore, Tamil Nadu, 632004, India.
Benjamin S Beresford-JonesCambridge Institute of Therapeutic Immunology and Infectious Disease, Jeffrey Cheah Biomedical Centre, Cambridge Biomedical Campus, Cambridge, UK.
Y Binesh LalDepartment of Clinical Microbiology, Christian Medical College, Vellore, Tamil Nadu, 632004, India.
Chaitra ShankarDepartment of Clinical Microbiology, Christian Medical College, Vellore, Tamil Nadu, 632004, India.
M YesudossDepartment of Clinical Microbiology, Christian Medical College, Vellore, Tamil Nadu, 632004, India.
Fiza AbdullahDepartment of Clinical Microbiology, Christian Medical College, Vellore, Tamil Nadu, 632004, India.
T Monisha PriyaDepartment of Clinical Microbiology, Christian Medical College, Vellore, Tamil Nadu, 632004, India.
Sanika KulkarniDepartment of Clinical Microbiology, Christian Medical College, Vellore, Tamil Nadu, 632004, India.
Stephen BakerCambridge Institute of Therapeutic Immunology and Infectious Disease, Jeffrey Cheah Biomedical Centre, Cambridge Biomedical Campus, Cambridge, UK.
Balaji VeeraraghavanDepartment of Clinical Microbiology, Christian Medical College, Vellore, Tamil Nadu, 632004, India. vbalaji@cmcvellore.ac.in.
Kamini WaliaDivision of Epidemiology and Communicable Diseases, Indian Council of Medical Research, New Delhi, India. waliakamini@yahoo.co.in.

Funding

Indian Council of Medical Research AMR/Adhoc/232/2020/ECD-II
6 · The paper itself

Abstract

backgroundKlebsiella pneumoniae is a common opportunistic pathogen in humans, often associated with both virulence and antimicrobial resistance (AMR) phenotypes. K. pneumoniae have a highly plastic genome and can act as a vehicle for disseminating genetic information. Aiming to assess the impact of the human-animal-environment interface on AMR dissemination in K. pneumoniae we sampled and genome sequenced organisms from a range of environments and compared their genetic composition.

methodsRepresentative K. pneumoniae isolated from clinical specimens (n = 59), livestock samples (n = 71), and hospital sewage samples (n = 16) during a two-year surveillance study were subjected to whole genome sequencing. We compared the taxonomic and genomic distribution of K. pneumoniae, AMR gene abundance, virulence gene composition, and mobile genetic elements between the three sources.

resultsThe K. pneumoniae isolates originating from livestock were clonally distinct from those derived from clinical/hospital effluent samples. Notably, the clinical and hospital sewage isolates typically possessed a greater number of resistance/virulence genes than those from animals. Overall, we observed a limited overlap of K. pneumoniae clones, AMR genes, virulence determinants, and plasmids between the different settings.

conclusionIn this setting, the spread of XDR and hypervirulent clones of K. pneumoniae appears to be restricted to humans with no obvious association with non-clinical sources. Emergent clones of K. pneumoniae carrying both resistance and virulence determinants are likely to have emerged in hospital settings rather than in animal or natural environments. These data challenge the current view of AMR transmission in K. pneumoniae in a One-Health context.

Indexed as

Klebsiella InfectionsKlebsiella pneumoniaeAnimalsAnti-Bacterial AgentsDisease ReservoirsDrug Resistance, BacterialHumansIndiaLivestockSewageAnti-Bacterial AgentsSewageAntimicrobial resistanceIndiaKlebsiella pneumoniaeLivestockOne health

Identifiers

PMID39531180
PMCPMC11652666

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.